LINC01265

Summary

LINC01265 (long intergenic non-protein coding RNA 1265, HGNC:50297) is a long non-coding RNA gene on chromosome 5p13.1.

At a glance

• GWAS associations: 1

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50297
Approved symbol	LINC01265
Name	long intergenic non-protein coding RNA 1265
Location	5p13.1
Locus type	RNA, long non-coding
Status	Approved
Entrez	101926904
RNAcentral	URS000056C8F0 — lncRNA, 800 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000027164 (5:38716901 C>A), RS1000058141 (5:38717331 C>A,T), RS1000141734 (5:38710579 T>C), RS1000513371 (5:38710863 A>G,T), RS1000918158 (5:38716651 G>A,C), RS1000955921 (5:38719194 A>G), RS1001028100 (5:38718983 G>C), RS1001340997 (5:38711514 G>A,T), RS1001506277 (5:38718280 C>G), RS1001576281 (5:38717970 G>A), RS1002154701 (5:38717477 T>C), RS1002185712 (5:38717731 G>A), RS1002486734 (5:38718834 C>G), RS1002694962 (5:38711146 A>C), RS1003519167 (5:38721102 A>G)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

1 associations (top):

Study	Trait	p-value
GCST003253_15	Microalbuminuria	8.000000e-06

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

CTD chemical–gene interactions

2 total (human), top 2 by PubMed support.

Chemical	Actions (top 5)	PubMed papers
Cadmium Chloride	decreases expression	1
Lactic Acid	decreases expression	1

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.