LINC01271

Summary

LINC01271 (long intergenic non-protein coding RNA 1271, HGNC:50327) is a long non-coding RNA gene on chromosome 20q13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50327
Approved symbol	LINC01271
Name	long intergenic non-protein coding RNA 1271
Location	20q13.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233077
Ensembl biotype	lncRNA
Entrez	101927586
RNAcentral	URS000075AA11 — lncRNA, 2266 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000441214, ENST00000689787, ENST00000692252, ENST00000850421, ENST00000850422, ENST00000850423

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441214 — 3 exons

Exon	Start	End
ENSE00001639236	50310711	50311249
ENSE00001726265	50321075	50321342
ENSE00001761487	50312914	50314356

Expression profiles

Bgee: expression breadth broad, 95 present calls, max score 73.97.

Top tissues by expression

203 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
myocardium	UBERON:0002349	73.97	gold quality
blood	UBERON:0000178	60.67	gold quality
parotid gland	UBERON:0001831	60.37	gold quality
esophagus squamous epithelium	UBERON:0006920	59.20	gold quality
buccal mucosa cell	CL:0002336	58.90	gold quality
mucosa of sigmoid colon	UBERON:0004993	58.43	gold quality
decidua	UBERON:0002450	58.29	gold quality
monocyte	CL:0000576	57.64	silver quality
gingival epithelium	UBERON:0001949	57.28	gold quality
gingiva	UBERON:0001828	57.01	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	56.96	gold quality
colonic mucosa	UBERON:0000317	56.85	gold quality
biceps brachii	UBERON:0001507	56.05	gold quality
heart right ventricle	UBERON:0002080	55.77	gold quality
bone marrow	UBERON:0002371	55.40	gold quality
cartilage tissue	UBERON:0002418	54.95	gold quality
lateral nuclear group of thalamus	UBERON:0002736	54.87	gold quality
skeletal muscle tissue	UBERON:0001134	54.81	gold quality
vastus lateralis	UBERON:0001379	54.55	gold quality
deltoid	UBERON:0001476	54.52	gold quality
corpus epididymis	UBERON:0004359	54.49	gold quality
quadriceps femoris	UBERON:0001377	54.23	gold quality
stromal cell of endometrium	CL:0002255	54.11	gold quality
nasal cavity epithelium	UBERON:0005384	53.47	gold quality
tendon	UBERON:0000043	53.03	gold quality
cauda epididymis	UBERON:0004360	52.82	gold quality
tendon of biceps brachii	UBERON:0008188	52.52	gold quality
vena cava	UBERON:0004087	52.47	gold quality
trabecular bone tissue	UBERON:0002483	52.43	gold quality
right adrenal gland	UBERON:0001233	52.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.