LINC01282

Summary

LINC01282 (long intergenic non-protein coding RNA 1282, HGNC:50338) is a long non-coding RNA gene on chromosome Xp11.4.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50338
Approved symbol	LINC01282
Name	long intergenic non-protein coding RNA 1282
Location	Xp11.4
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236747
Ensembl biotype	lncRNA
Entrez	101927449
RNAcentral	URS000075DC3E — lncRNA, 891 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000431646, ENST00000648247, ENST00000670107

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000431646 — 6 exons

Exon	Start	End
ENSE00001623111	39367513	39367591
ENSE00001694043	39391614	39391774
ENSE00001738883	39367285	39367423
ENSE00001740236	39376487	39376690
ENSE00001765545	39379051	39379226
ENSE00001805547	39376862	39376982

Expression profiles

Bgee: expression breadth broad, 50 present calls, max score 93.60.

Top tissues by expression

50 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.60	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	59.41	gold quality
gall bladder	UBERON:0002110	53.29	gold quality
lower esophagus muscularis layer	UBERON:0035833	50.84	gold quality
prefrontal cortex	UBERON:0000451	50.78	gold quality
monocyte	CL:0000576	48.92	silver quality
blood	UBERON:0000178	48.77	gold quality
placenta	UBERON:0001987	48.36	gold quality
vermiform appendix	UBERON:0001154	48.15	gold quality
frontal cortex	UBERON:0001870	46.91	gold quality
islet of Langerhans	UBERON:0000006	46.52	silver quality
superior frontal gyrus	UBERON:0002661	45.37	silver quality
muscle of leg	UBERON:0001383	44.99	silver quality
gastrocnemius	UBERON:0001388	44.47	silver quality
descending thoracic aorta	UBERON:0002345	42.94	silver quality
primary visual cortex	UBERON:0002436	42.90	silver quality
subcutaneous adipose tissue	UBERON:0002190	42.55	silver quality
Brodmann (1909) area 9	UBERON:0013540	42.39	silver quality
nucleus accumbens	UBERON:0001882	42.13	silver quality
vagina	UBERON:0000996	42.07	silver quality
skin of abdomen	UBERON:0001416	41.59	silver quality
anterior cingulate cortex	UBERON:0009835	41.17	gold quality
putamen	UBERON:0001874	41.01	silver quality
caudate nucleus	UBERON:0001873	40.84	silver quality
heart left ventricle	UBERON:0002084	40.60	silver quality
hypothalamus	UBERON:0001898	40.35	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	40.17	silver quality
zone of skin	UBERON:0000014	40.11	silver quality
right atrium auricular region	UBERON:0006631	39.85	silver quality
colon	UBERON:0001155	39.55	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.