LINC01284

Summary

LINC01284 (long intergenic non-protein coding RNA 1284, HGNC:50342) is a long non-coding RNA gene on chromosome Xp11.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50342
Approved symbol	LINC01284
Name	long intergenic non-protein coding RNA 1284
Location	Xp11.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230317
Ensembl biotype	lncRNA
Entrez	101926971
RNAcentral	URS0000BC451A — lncRNA, 763 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 90 — 90 lncRNA

ENST00000425150, ENST00000442994, ENST00000659896, ENST00000665808, ENST00000666173, ENST00000668331, ENST00000669956, ENST00000701290, ENST00000717296, ENST00000717297, ENST00000717298, ENST00000767454, ENST00000767455, ENST00000767456, ENST00000767457, ENST00000767458, ENST00000767459, ENST00000767460, ENST00000767461, ENST00000767462, ENST00000767463, ENST00000767464, ENST00000767465, ENST00000767466, ENST00000767467, ENST00000767468, ENST00000767469, ENST00000767470, ENST00000767471, ENST00000767472, ENST00000767473, ENST00000767474, ENST00000767475, ENST00000767476, ENST00000767477, ENST00000767478, ENST00000767479, ENST00000767480, ENST00000767481, ENST00000767482, ENST00000767483, ENST00000767484, ENST00000767485, ENST00000767486, ENST00000767487, ENST00000767488, ENST00000767489, ENST00000767490, ENST00000767491, ENST00000767492, ENST00000767493, ENST00000767494, ENST00000767495, ENST00000767496, ENST00000767497, ENST00000767498, ENST00000767499, ENST00000767500, ENST00000767501, ENST00000767502, ENST00000767503, ENST00000767504, ENST00000767505, ENST00000767506, ENST00000767507, ENST00000767508, ENST00000767509, ENST00000767510, ENST00000767511, ENST00000767512, ENST00000767513, ENST00000767514, ENST00000767515, ENST00000767516, ENST00000767517, ENST00000767518, ENST00000767519, ENST00000767520, ENST00000767521, ENST00000767522, ENST00000767523, ENST00000767524, ENST00000767525, ENST00000767526, ENST00000767527, ENST00000767528, ENST00000767529, ENST00000767530, ENST00000767531, ENST00000767532

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425150 — 9 exons

Exon	Start	End
ENSE00001703251	51396096	51396462
ENSE00003857972	51222654	51222967
ENSE00003859883	51340284	51340402
ENSE00003869528	51329424	51329565
ENSE00003869784	51327721	51327822
ENSE00003875898	51224147	51224243
ENSE00003886967	51190598	51191523
ENSE00004032143	51356944	51357027
ENSE00004032147	51340073	51340132

Expression profiles

Bgee: expression breadth ubiquitous, 109 present calls, max score 75.10.

Top tissues by expression

109 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.10	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.62	gold quality
cerebellar hemisphere	UBERON:0002245	64.70	gold quality
cerebellar cortex	UBERON:0002129	64.57	gold quality
cerebellum	UBERON:0002037	64.45	gold quality
nucleus accumbens	UBERON:0001882	63.91	gold quality
right hemisphere of cerebellum	UBERON:0014890	63.46	gold quality
superior frontal gyrus	UBERON:0002661	62.95	gold quality
skeletal muscle tissue	UBERON:0001134	62.39	gold quality
putamen	UBERON:0001874	61.97	gold quality
sural nerve	UBERON:0015488	61.46	silver quality
caudate nucleus	UBERON:0001873	61.28	gold quality
Brodmann (1909) area 9	UBERON:0013540	61.18	gold quality
primary visual cortex	UBERON:0002436	59.73	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	59.62	gold quality
brain	UBERON:0000955	59.28	gold quality
prefrontal cortex	UBERON:0000451	59.24	gold quality
frontal cortex	UBERON:0001870	59.18	gold quality
right frontal lobe	UBERON:0002810	58.89	gold quality
ganglionic eminence	UBERON:0004023	58.72	gold quality
cerebral cortex	UBERON:0000956	58.19	gold quality
anterior cingulate cortex	UBERON:0009835	57.97	gold quality
hypothalamus	UBERON:0001898	57.49	gold quality
pituitary gland	UBERON:0000007	56.07	gold quality
adenohypophysis	UBERON:0002196	55.99	gold quality
cortex of kidney	UBERON:0001225	55.98	gold quality
placenta	UBERON:0001987	54.76	gold quality
amygdala	UBERON:0001876	54.43	gold quality
Ammon’s horn	UBERON:0001954	53.30	gold quality
bone marrow	UBERON:0002371	52.85	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.