LINC01285

Summary

LINC01285 (long intergenic non-protein coding RNA 1285, HGNC:50344) is a long non-coding RNA gene on chromosome Xq24.

Predicted to be involved in miRNA-mediated post-transcriptional gene silencing.

Source: NCBI Gene 101928287 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50344
Approved symbol	LINC01285
Name	long intergenic non-protein coding RNA 1285
Location	Xq24
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000203650
Ensembl biotype	lncRNA
Entrez	101928287
RNAcentral	URS000075C023 — lncRNA, 837 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 24 — 24 lncRNA

ENST00000412422, ENST00000608172, ENST00000634488, ENST00000634601, ENST00000655074, ENST00000656178, ENST00000657695, ENST00000657870, ENST00000661086, ENST00000661672, ENST00000666896, ENST00000667717, ENST00000751846, ENST00000751847, ENST00000808811, ENST00000808812, ENST00000808813, ENST00000808814, ENST00000808815, ENST00000808816, ENST00000808817, ENST00000808818, ENST00000808819, ENST00000808820

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412422 — 7 exons

Exon	Start	End
ENSE00001708842	118847054	118847129
ENSE00001709802	118845241	118845285
ENSE00001721710	118855464	118855555
ENSE00001732344	118845950	118846064
ENSE00003785511	118841815	118841871
ENSE00004203954	118839543	118839775
ENSE00004203965	118856197	118857867

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 80.52.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.52	gold quality
corpus callosum	UBERON:0002336	75.32	gold quality
sural nerve	UBERON:0015488	73.05	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	72.56	gold quality
substantia nigra	UBERON:0002038	70.91	gold quality
putamen	UBERON:0001874	70.89	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.97	gold quality
calcaneal tendon	UBERON:0003701	69.46	gold quality
nucleus accumbens	UBERON:0001882	69.18	gold quality
Ammon’s horn	UBERON:0001954	69.17	gold quality
amygdala	UBERON:0001876	68.73	gold quality
temporal lobe	UBERON:0001871	68.63	gold quality
caudate nucleus	UBERON:0001873	68.56	gold quality
hypothalamus	UBERON:0001898	68.00	gold quality
hindlimb stylopod muscle	UBERON:0004252	67.98	gold quality
brain	UBERON:0000955	66.22	gold quality
liver	UBERON:0002107	65.87	gold quality
muscle of leg	UBERON:0001383	65.44	gold quality
primary visual cortex	UBERON:0002436	65.41	gold quality
adrenal tissue	UBERON:0018303	65.29	gold quality
gastrocnemius	UBERON:0001388	65.15	gold quality
cerebral cortex	UBERON:0000956	64.82	gold quality
right adrenal gland cortex	UBERON:0035827	64.82	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.73	gold quality
right adrenal gland	UBERON:0001233	64.63	gold quality
left adrenal gland	UBERON:0001234	64.57	gold quality
pituitary gland	UBERON:0000007	64.53	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	64.31	gold quality
left adrenal gland cortex	UBERON:0035825	64.30	gold quality
adenohypophysis	UBERON:0002196	64.24	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.32

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.