LINC01290

Summary

LINC01290 (long intergenic non-protein coding RNA 1290, HGNC:50356) is a long non-coding RNA gene on chromosome 16p13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50356
Approved symbol	LINC01290
Name	long intergenic non-protein coding RNA 1290
Location	16p13.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260468
Ensembl biotype	lncRNA
Entrez	106144584
RNAcentral	URS0000BC45FA — lncRNA, 498 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000566787

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000566787 — 2 exons

Exon	Start	End
ENSE00002594628	10528092	10528202
ENSE00002597427	10514842	10515232

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 91.72.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.72	silver quality
sural nerve	UBERON:0015488	88.93	gold quality
calcaneal tendon	UBERON:0003701	76.47	gold quality
colonic epithelium	UBERON:0000397	76.37	gold quality
skeletal muscle tissue	UBERON:0001134	69.92	gold quality
lung	UBERON:0002048	67.52	gold quality
upper lobe of left lung	UBERON:0008952	67.39	gold quality
right lung	UBERON:0002167	67.22	gold quality
tonsil	UBERON:0002372	66.34	gold quality
lower esophagus mucosa	UBERON:0035834	62.97	gold quality
corpus callosum	UBERON:0002336	62.31	gold quality
skin of abdomen	UBERON:0001416	61.61	gold quality
urinary bladder	UBERON:0001255	61.23	gold quality
zone of skin	UBERON:0000014	60.99	gold quality
skin of leg	UBERON:0001511	59.99	gold quality
esophagus mucosa	UBERON:0002469	59.82	gold quality
placenta	UBERON:0001987	59.52	gold quality
liver	UBERON:0002107	58.98	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.88	gold quality
bone marrow	UBERON:0002371	57.47	gold quality
left coronary artery	UBERON:0001626	56.75	gold quality
ascending aorta	UBERON:0001496	56.73	gold quality
thoracic aorta	UBERON:0001515	56.63	gold quality
popliteal artery	UBERON:0002250	56.60	gold quality
tibial artery	UBERON:0007610	56.56	gold quality
smooth muscle tissue	UBERON:0001135	56.17	gold quality
esophagus	UBERON:0001043	55.90	gold quality
left ovary	UBERON:0002119	55.73	gold quality
ovary	UBERON:0000992	55.69	gold quality
tibial nerve	UBERON:0001323	55.58	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.