LINC01303

Summary

LINC01303 (long intergenic non-protein coding RNA 1303, HGNC:50470) is a long non-coding RNA gene on chromosome 14q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50470
Approved symbol	LINC01303
Name	long intergenic non-protein coding RNA 1303
Location	14q23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250548
Ensembl biotype	lncRNA
Entrez	101927780
RNAcentral	URS000075E385 — lncRNA, 5151 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000508827, ENST00000553288, ENST00000668001, ENST00000835965, ENST00000835966, ENST00000835967, ENST00000835968, ENST00000835969, ENST00000835970

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000508827 — 5 exons

Exon	Start	End
ENSE00002027997	61565320	61565388
ENSE00002049968	61570486	61570653
ENSE00002061532	61556320	61556552
ENSE00002064690	61569544	61569677
ENSE00002070975	61560743	61565241

Expression profiles

Bgee: expression breadth ubiquitous, 119 present calls, max score 76.49.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.7363 / max 556.1387, expressed in 106 samples.

FANTOM5 promoters (5 alternative TSS)

Promoter ID	TPM avg	Samples expressed
143571	1.1496	86
143570	0.2475	47
143568	0.2132	36
143569	0.0880	19
143567	0.0381	8

Top tissues by expression

119 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
metanephros cortex	UBERON:0010533	76.49	gold quality
bone marrow cell	CL:0002092	73.64	silver quality
kidney	UBERON:0002113	71.75	gold quality
adult mammalian kidney	UBERON:0000082	71.60	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	71.37	gold quality
right adrenal gland	UBERON:0001233	69.91	gold quality
left adrenal gland cortex	UBERON:0035825	69.53	gold quality
cortex of kidney	UBERON:0001225	69.47	gold quality
blood	UBERON:0000178	69.28	gold quality
colonic epithelium	UBERON:0000397	68.77	silver quality
right adrenal gland cortex	UBERON:0035827	68.37	gold quality
left adrenal gland	UBERON:0001234	68.14	gold quality
vermiform appendix	UBERON:0001154	67.24	gold quality
muscle tissue	UBERON:0002385	67.08	gold quality
adrenal gland	UBERON:0002369	66.99	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.55	gold quality
bone marrow	UBERON:0002371	65.88	gold quality
right testis	UBERON:0004534	65.50	gold quality
skeletal muscle tissue	UBERON:0001134	65.28	silver quality
left testis	UBERON:0004533	64.06	gold quality
cerebellar hemisphere	UBERON:0002245	63.99	gold quality
testis	UBERON:0000473	63.91	gold quality
cerebellar cortex	UBERON:0002129	63.88	gold quality
cerebellum	UBERON:0002037	63.81	gold quality
lymph node	UBERON:0000029	63.38	gold quality
right hemisphere of cerebellum	UBERON:0014890	63.31	gold quality
smooth muscle tissue	UBERON:0001135	63.04	gold quality
gall bladder	UBERON:0002110	63.02	gold quality
left coronary artery	UBERON:0001626	62.43	gold quality
placenta	UBERON:0001987	62.25	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.86

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.