LINC01307

Summary

LINC01307 (long intergenic non-protein coding RNA 1307, HGNC:50494) is a long non-coding RNA gene on chromosome 1p21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50494
Approved symbol	LINC01307
Name	long intergenic non-protein coding RNA 1307
Location	1p21.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-157N3.1
Ensembl gene	ENSG00000231671
Ensembl biotype	lncRNA
Entrez	104355286
RNAcentral	URS0000512607 — lncRNA, 474 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000439146, ENST00000444327, ENST00000454466, ENST00000718514

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000439146 — 5 exons

Exon	Start	End
ENSE00001633562	101323837	101323875
ENSE00001643445	101350047	101350185
ENSE00001666609	101345763	101345845
ENSE00001711727	101377258	101377313
ENSE00001799231	101343839	101343995

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 73.55.

Top tissues by expression

81 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	73.55	gold quality
ganglionic eminence	UBERON:0004023	60.71	gold quality
skeletal muscle tissue	UBERON:0001134	56.54	gold quality
right lobe of liver	UBERON:0001114	55.63	gold quality
calcaneal tendon	UBERON:0003701	55.07	silver quality
muscle of leg	UBERON:0001383	53.09	gold quality
gastrocnemius	UBERON:0001388	52.88	gold quality
blood	UBERON:0000178	52.64	gold quality
islet of Langerhans	UBERON:0000006	52.07	gold quality
prefrontal cortex	UBERON:0000451	51.48	gold quality
pancreas	UBERON:0001264	51.47	gold quality
lymph node	UBERON:0000029	51.35	gold quality
cortex of kidney	UBERON:0001225	51.02	silver quality
placenta	UBERON:0001987	50.85	gold quality
tibial nerve	UBERON:0001323	50.67	gold quality
monocyte	CL:0000576	50.38	silver quality
left adrenal gland cortex	UBERON:0035825	48.19	gold quality
primary visual cortex	UBERON:0002436	47.88	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	47.74	silver quality
ascending aorta	UBERON:0001496	46.81	gold quality
body of pancreas	UBERON:0001150	46.42	gold quality
body of uterus	UBERON:0009853	46.30	gold quality
spleen	UBERON:0002106	45.97	gold quality
pituitary gland	UBERON:0000007	45.85	gold quality
multicellular organism	UBERON:0000468	45.46	gold quality
cerebellar cortex	UBERON:0002129	45.44	silver quality
granulocyte	CL:0000094	45.40	silver quality
subcutaneous adipose tissue	UBERON:0002190	44.95	gold quality
stomach	UBERON:0000945	44.84	gold quality
esophagus mucosa	UBERON:0002469	44.78	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.10

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.