LINC01310

Summary

LINC01310 (long intergenic non-protein coding RNA 1310, HGNC:50501) is a long non-coding RNA gene on chromosome 22q13.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50501
Approved symbol	LINC01310
Name	long intergenic non-protein coding RNA 1310
Location	22q13.32
Locus type	RNA, long non-coding
Status	Approved
Aliases	WI2-81516E3.1
Ensembl gene	ENSG00000205632
Ensembl biotype	lncRNA
Entrez	100128946
RNAcentral	URS000075AD94 — lncRNA, 4015 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000380981, ENST00000660776, ENST00000785412, ENST00000785413

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000380981 — 7 exons

Exon	Start	End
ENSE00001487088	48896798	48898386
ENSE00001487089	48894735	48896143
ENSE00001487091	48894404	48894615
ENSE00001591865	48892666	48893132
ENSE00003785884	48885053	48885112
ENSE00003788649	48866770	48866847
ENSE00003789616	48887013	48887212

Expression profiles

Bgee: expression breadth broad, 78 present calls, max score 75.14.

Top tissues by expression

192 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
C1 segment of cervical spinal cord	UBERON:0006469	75.14	gold quality
spinal cord	UBERON:0002240	73.66	gold quality
sural nerve	UBERON:0015488	72.99	gold quality
nasal cavity mucosa	UBERON:0001826	64.45	gold quality
tibial nerve	UBERON:0001323	64.38	gold quality
myocardium	UBERON:0002349	64.28	gold quality
cortex of kidney	UBERON:0001225	63.71	gold quality
sperm	CL:0000019	63.55	gold quality
nasal cavity epithelium	UBERON:0005384	63.11	gold quality
parotid gland	UBERON:0001831	61.54	gold quality
cortical plate	UBERON:0005343	60.76	silver quality
cerebellar vermis	UBERON:0004720	59.71	gold quality
substantia nigra	UBERON:0002038	59.48	gold quality
right lobe of liver	UBERON:0001114	59.45	gold quality
midbrain	UBERON:0001891	59.34	gold quality
cardia of stomach	UBERON:0001162	59.32	gold quality
subthalamic nucleus	UBERON:0001906	58.68	gold quality
ventral tegmental area	UBERON:0002691	58.39	gold quality
saphenous vein	UBERON:0007318	58.16	gold quality
tonsil	UBERON:0002372	58.11	gold quality
trigeminal ganglion	UBERON:0001675	58.08	gold quality
pericardium	UBERON:0002407	58.04	gold quality
dorsal plus ventral thalamus	UBERON:0001897	57.99	gold quality
medulla oblongata	UBERON:0001896	57.95	gold quality
inferior vagus X ganglion	UBERON:0005363	57.93	gold quality
ventricular zone	UBERON:0003053	57.92	silver quality
superficial temporal artery	UBERON:0001614	57.91	gold quality
fundus of stomach	UBERON:0001160	57.84	gold quality
right frontal lobe	UBERON:0002810	57.81	gold quality
dorsal root ganglion	UBERON:0000044	57.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.