LINC01318

Summary

LINC01318 (long intergenic non-protein coding RNA 1318, HGNC:50524) is a long non-coding RNA gene on chromosome 2p22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50524
Approved symbol	LINC01318
Name	long intergenic non-protein coding RNA 1318
Location	2p22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237790
Ensembl biotype	lncRNA
Entrez	106144585
RNAcentral	URS000015D39F — lncRNA, 597 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000423593

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423593 — 3 exons

Exon	Start	End
ENSE00001602004	34068214	34068280
ENSE00001638643	34067226	34067303
ENSE00001655968	34069099	34069550

Expression profiles

Bgee: expression breadth broad, 83 present calls, max score 80.30.

Top tissues by expression

83 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.30	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.96	gold quality
ganglionic eminence	UBERON:0004023	71.28	gold quality
urinary bladder	UBERON:0001255	59.36	gold quality
lower esophagus mucosa	UBERON:0035834	59.19	gold quality
monocyte	CL:0000576	55.92	gold quality
primary visual cortex	UBERON:0002436	54.97	gold quality
prefrontal cortex	UBERON:0000451	54.61	gold quality
adrenal tissue	UBERON:0018303	53.80	gold quality
blood	UBERON:0000178	53.67	gold quality
endometrium	UBERON:0001295	52.68	gold quality
liver	UBERON:0002107	51.04	gold quality
calcaneal tendon	UBERON:0003701	50.86	silver quality
cortex of kidney	UBERON:0001225	50.25	gold quality
fundus of stomach	UBERON:0001160	49.68	gold quality
gastrocnemius	UBERON:0001388	49.10	gold quality
mucosa of transverse colon	UBERON:0004991	48.01	gold quality
kidney	UBERON:0002113	47.85	silver quality
heart left ventricle	UBERON:0002084	47.26	gold quality
right lobe of liver	UBERON:0001114	47.19	silver quality
islet of Langerhans	UBERON:0000006	46.83	gold quality
heart	UBERON:0000948	46.31	gold quality
stomach	UBERON:0000945	46.09	gold quality
pancreas	UBERON:0001264	45.72	silver quality
lung	UBERON:0002048	44.61	silver quality
adult mammalian kidney	UBERON:0000082	44.36	silver quality
right lobe of thyroid gland	UBERON:0001119	44.18	silver quality
body of pancreas	UBERON:0001150	43.84	silver quality
esophagus mucosa	UBERON:0002469	43.76	gold quality
esophagus	UBERON:0001043	43.56	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.