LINC01327

Summary

LINC01327 (long intergenic non-protein coding RNA 1327, HGNC:50533) is a long non-coding RNA gene on chromosome 3q26.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50533
Approved symbol	LINC01327
Name	long intergenic non-protein coding RNA 1327
Location	3q26.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00005644
Ensembl gene	ENSG00000241669
Ensembl biotype	lncRNA
Entrez	104310350
RNAcentral	URS00001AB528 — lncRNA, 535 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000498413

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000498413 — 4 exons

Exon	Start	End
ENSE00001840402	167392796	167392865
ENSE00001860486	167401337	167401437
ENSE00001890269	167408239	167408519
ENSE00001923519	167399495	167399577

Expression profiles

Bgee: expression breadth broad, 34 present calls, max score 85.73.

Top tissues by expression

34 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.73	silver quality
monocyte	CL:0000576	55.05	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	53.92	gold quality
prefrontal cortex	UBERON:0000451	52.29	gold quality
blood	UBERON:0000178	49.98	silver quality
left coronary artery	UBERON:0001626	49.28	gold quality
amygdala	UBERON:0001876	44.90	gold quality
gastrocnemius	UBERON:0001388	44.60	silver quality
stomach	UBERON:0000945	43.18	silver quality
body of pancreas	UBERON:0001150	42.92	silver quality
Brodmann (1909) area 9	UBERON:0013540	42.73	gold quality
anterior cingulate cortex	UBERON:0009835	42.60	gold quality
upper lobe of left lung	UBERON:0008952	42.40	silver quality
skin of leg	UBERON:0001511	42.25	silver quality
lower esophagus muscularis layer	UBERON:0035833	41.90	silver quality
nucleus accumbens	UBERON:0001882	41.84	silver quality
substantia nigra	UBERON:0002038	41.74	silver quality
right atrium auricular region	UBERON:0006631	41.74	silver quality
esophagus mucosa	UBERON:0002469	41.59	silver quality
body of stomach	UBERON:0001161	41.15	silver quality
heart left ventricle	UBERON:0002084	41.09	silver quality
skin of abdomen	UBERON:0001416	40.88	silver quality
putamen	UBERON:0001874	39.83	silver quality
right frontal lobe	UBERON:0002810	39.62	silver quality
spleen	UBERON:0002106	38.40	silver quality
omental fat pad	UBERON:0010414	38.12	silver quality
muscle layer of sigmoid colon	UBERON:0035805	37.66	silver quality
hypothalamus	UBERON:0001898	37.44	silver quality
vagina	UBERON:0000996	37.30	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	36.85	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.