LINC01345

Summary

LINC01345 (long intergenic non-protein coding RNA 1345, HGNC:50564) is a long non-coding RNA gene on chromosome 1p36.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50564
Approved symbol	LINC01345
Name	long intergenic non-protein coding RNA 1345
Location	1p36.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226374
Ensembl biotype	lncRNA
Entrez	105376672
RNAcentral	URS0000BC4518 — lncRNA, 944 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000425194, ENST00000635127, ENST00000635247, ENST00000671015, ENST00000816877

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425194 — 3 exons

Exon	Start	End
ENSE00001656760	3947957	3948595
ENSE00001693410	3948863	3949024
ENSE00001732853	3947144	3947328

Expression profiles

Bgee: expression breadth broad, 74 present calls, max score 78.52.

Top tissues by expression

191 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.52	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.38	silver quality
sural nerve	UBERON:0015488	63.52	silver quality
smooth muscle tissue	UBERON:0001135	63.40	gold quality
lower esophagus muscularis layer	UBERON:0035833	58.11	gold quality
lower esophagus	UBERON:0013473	57.98	gold quality
esophagus	UBERON:0001043	54.91	gold quality
seminal vesicle	UBERON:0000998	54.80	gold quality
muscle layer of sigmoid colon	UBERON:0035805	54.20	gold quality
lower esophagus mucosa	UBERON:0035834	53.65	gold quality
prefrontal cortex	UBERON:0000451	52.64	gold quality
monocyte	CL:0000576	52.06	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	51.95	gold quality
islet of Langerhans	UBERON:0000006	51.86	gold quality
esophagus mucosa	UBERON:0002469	51.77	gold quality
body of uterus	UBERON:0009853	51.41	gold quality
left testis	UBERON:0004533	51.19	gold quality
buccal mucosa cell	CL:0002336	51.10	gold quality
testis	UBERON:0000473	49.91	gold quality
myometrium	UBERON:0001296	49.70	gold quality
upper leg skin	UBERON:0004262	49.02	silver quality
prostate gland	UBERON:0002367	48.96	gold quality
muscle of leg	UBERON:0001383	48.85	gold quality
right testis	UBERON:0004534	48.64	gold quality
colon	UBERON:0001155	48.60	gold quality
vagina	UBERON:0000996	48.51	gold quality
gastrocnemius	UBERON:0001388	48.31	gold quality
large intestine	UBERON:0000059	47.94	gold quality
adenohypophysis	UBERON:0002196	47.89	gold quality
tendon of biceps brachii	UBERON:0008188	47.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.