LINC01347

Summary

LINC01347 (long intergenic non-protein coding RNA 1347, HGNC:50566) is a unprocessed pseudogene on chromosome 1q43.

At a glance

• Gene type: non-coding (transcribed_unprocessed_pseudogene) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50566
Approved symbol	LINC01347
Name	long intergenic non-protein coding RNA 1347
Location	1q43
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000214837
Ensembl biotype	transcribed_unprocessed_pseudogene
Entrez	731275
RNAcentral	URS000075DD96 — lncRNA, 3834 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 transcribed_unprocessed_pseudogene

ENST00000417964

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417964 — 4 exons

Exon	Start	End
ENSE00001747036	243088136	243088232
ENSE00002340767	243091531	243091596
ENSE00002389344	243097190	243097299
ENSE00003764084	243087710	243087791

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 78.44.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.44	gold quality
right testis	UBERON:0004534	77.98	gold quality
left testis	UBERON:0004533	77.23	gold quality
testis	UBERON:0000473	76.61	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.43	gold quality
mucosa of stomach	UBERON:0001199	64.68	gold quality
blood	UBERON:0000178	62.33	gold quality
apex of heart	UBERON:0002098	61.34	gold quality
bone marrow	UBERON:0002371	60.99	gold quality
granulocyte	CL:0000094	60.85	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.03	gold quality
subcutaneous adipose tissue	UBERON:0002190	59.17	gold quality
colonic epithelium	UBERON:0000397	58.56	silver quality
bone marrow cell	CL:0002092	58.44	gold quality
skin of leg	UBERON:0001511	58.15	gold quality
right adrenal gland	UBERON:0001233	57.90	gold quality
right adrenal gland cortex	UBERON:0035827	57.75	gold quality
adipose tissue	UBERON:0001013	57.49	gold quality
popliteal artery	UBERON:0002250	57.49	gold quality
tibial artery	UBERON:0007610	57.49	gold quality
placenta	UBERON:0001987	57.44	gold quality
cortex of kidney	UBERON:0001225	57.39	gold quality
gastrocnemius	UBERON:0001388	57.22	gold quality
zone of skin	UBERON:0000014	57.13	gold quality
muscle of leg	UBERON:0001383	57.05	gold quality
smooth muscle tissue	UBERON:0001135	56.96	gold quality
lower esophagus muscularis layer	UBERON:0035833	56.75	gold quality
right ovary	UBERON:0002118	56.73	gold quality
lower esophagus	UBERON:0013473	56.73	gold quality
myometrium	UBERON:0001296	56.53	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.41

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 2)

• Long Noncoding RNA LINC01347 Modulated Lidocaine-Induced Cytotoxicity in SH-SY5Y Cells by Interacting with hsa-miR-145-5p. (PMID:34115321)
• Long non-coding RNA LINC01347 suppresses trophoblast cell migration, invasion and EMT by regulating miR-101-3p/PTEN/AKT axis. (PMID:35810709)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.