LINC01359

Summary

LINC01359 (long intergenic non-protein coding RNA 1359, HGNC:50591) is a long non-coding RNA gene on chromosome 1p31.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50591
Approved symbol	LINC01359
Name	long intergenic non-protein coding RNA 1359
Location	1p31.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226891
Ensembl biotype	lncRNA
Entrez	101927084
RNAcentral	URS000075C44C — lncRNA, 1108 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 22 — 22 lncRNA

ENST00000415842, ENST00000436350, ENST00000444349, ENST00000447748, ENST00000634604, ENST00000634775, ENST00000634799, ENST00000635398, ENST00000635626, ENST00000647968, ENST00000654678, ENST00000654680, ENST00000654707, ENST00000658189, ENST00000658816, ENST00000663993, ENST00000664673, ENST00000666562, ENST00000668343, ENST00000669029, ENST00000670320, ENST00000730861

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000415842 — 6 exons

Exon	Start	End
ENSE00001623131	64991298	64991441
ENSE00001631969	65002329	65002476
ENSE00001641060	64987263	64987673
ENSE00001643771	64989435	64989494
ENSE00001675678	64994987	64995088
ENSE00001804276	64979577	64979868

Expression profiles

Bgee: expression breadth ubiquitous, 162 present calls, max score 84.47.

FANTOM5 (CAGE): breadth broad, TPM avg 1.7354 / max 207.9521, expressed in 186 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
12677	1.3195	167
12678	0.2708	63
12676	0.0885	43
12679	0.0566	25

Top tissues by expression

245 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	84.47	gold quality
colonic epithelium	UBERON:0000397	79.88	gold quality
right ovary	UBERON:0002118	78.65	gold quality
left ovary	UBERON:0002119	77.50	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.33	gold quality
sural nerve	UBERON:0015488	74.39	gold quality
body of uterus	UBERON:0009853	73.20	gold quality
right lobe of thyroid gland	UBERON:0001119	72.85	gold quality
mucosa of stomach	UBERON:0001199	72.74	gold quality
right coronary artery	UBERON:0001625	72.68	gold quality
descending thoracic aorta	UBERON:0002345	72.41	gold quality
ovary	UBERON:0000992	72.30	gold quality
bone marrow cell	CL:0002092	72.03	gold quality
left lobe of thyroid gland	UBERON:0001120	71.95	gold quality
tibial artery	UBERON:0007610	71.92	gold quality
popliteal artery	UBERON:0002250	71.91	gold quality
right uterine tube	UBERON:0001302	71.85	gold quality
right testis	UBERON:0004534	71.81	gold quality
aorta	UBERON:0000947	71.67	gold quality
thoracic aorta	UBERON:0001515	71.60	gold quality
ascending aorta	UBERON:0001496	71.51	gold quality
endocervix	UBERON:0000458	71.37	gold quality
left testis	UBERON:0004533	71.33	gold quality
apex of heart	UBERON:0002098	71.30	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.29	gold quality
left coronary artery	UBERON:0001626	71.25	gold quality
tibial nerve	UBERON:0001323	71.17	gold quality
thyroid gland	UBERON:0002046	71.15	gold quality
hindlimb stylopod muscle	UBERON:0004252	70.93	gold quality
sperm	CL:0000019	70.54	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.51

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.