LINC01360

Summary

LINC01360 (long intergenic non-protein coding RNA 1360, HGNC:50593) is a long non-coding RNA gene on chromosome 1p31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50593
Approved symbol	LINC01360
Name	long intergenic non-protein coding RNA 1360
Location	1p31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000233973
Ensembl biotype	lncRNA
Entrez	101927295
RNAcentral	URS00003E6B77 — lncRNA, 3871 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 20 — 20 lncRNA

ENST00000411903, ENST00000415686, ENST00000440762, ENST00000444827, ENST00000452553, ENST00000635317, ENST00000654152, ENST00000656781, ENST00000657455, ENST00000658942, ENST00000661322, ENST00000661787, ENST00000662360, ENST00000663350, ENST00000664468, ENST00000666103, ENST00000670941, ENST00000729759, ENST00000729760, ENST00000729761

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411903 — 2 exons

Exon	Start	End
ENSE00001788419	73307168	73307572
ENSE00001794708	73306239	73306274

Expression profiles

Bgee: expression breadth broad, 52 present calls, max score 80.73.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0175 / max 19.3967, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
3503	0.0175	3

Top tissues by expression

167 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.73	gold quality
right testis	UBERON:0004534	76.20	gold quality
cortical plate	UBERON:0005343	71.77	gold quality
left testis	UBERON:0004533	70.12	gold quality
testis	UBERON:0000473	70.03	gold quality
sperm	CL:0000019	67.67	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.13	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	57.79	gold quality
biceps brachii	UBERON:0001507	56.85	gold quality
quadriceps femoris	UBERON:0001377	55.40	gold quality
parotid gland	UBERON:0001831	55.32	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.89	gold quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
vastus lateralis	UBERON:0001379	54.67	gold quality
gingival epithelium	UBERON:0001949	54.51	gold quality
vena cava	UBERON:0004087	54.45	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
monocyte	CL:0000576	54.19	gold quality
gingiva	UBERON:0001828	54.07	gold quality
skeletal muscle tissue	UBERON:0001134	54.03	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
epithelial cell of pancreas	CL:0000083	53.79	gold quality
metanephros	UBERON:0000081	53.69	gold quality
heart right ventricle	UBERON:0002080	53.52	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
nasal cavity epithelium	UBERON:0005384	53.27	gold quality
deltoid	UBERON:0001476	52.92	gold quality
pancreatic ductal cell	CL:0002079	52.91	silver quality
adult organism	UBERON:0007023	52.31	silver quality
gastrocnemius	UBERON:0001388	51.99	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.23

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.