LINC01363

Summary

LINC01363 (long intergenic non-protein coding RNA 1363, HGNC:50598) is a long non-coding RNA gene on chromosome 1q24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50598
Approved symbol	LINC01363
Name	long intergenic non-protein coding RNA 1363
Location	1q24.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	RBSG4
Ensembl gene	ENSG00000231605
Ensembl biotype	lncRNA
Entrez	101928484
RNAcentral	URS000075E66A — lncRNA, 1854 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000426709, ENST00000428030, ENST00000446687, ENST00000457941

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000426709 — 5 exons

Exon	Start	End
ENSE00001625090	167182042	167182193
ENSE00001637275	167176693	167176815
ENSE00001661468	167195689	167195789
ENSE00001701860	167175917	167176412
ENSE00001710606	167195058	167195156

Expression profiles

Bgee: expression breadth ubiquitous, 110 present calls, max score 68.05.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0228 / max 39.4899, expressed in 1 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
15760	0.0129	1
15761	0.0099	1

Top tissues by expression

110 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.05	gold quality
skeletal muscle tissue	UBERON:0001134	62.43	gold quality
sural nerve	UBERON:0015488	61.04	silver quality
ganglionic eminence	UBERON:0004023	60.68	gold quality
ventricular zone	UBERON:0003053	58.70	silver quality
hindlimb stylopod muscle	UBERON:0004252	54.19	gold quality
monocyte	CL:0000576	53.43	silver quality
left adrenal gland cortex	UBERON:0035825	52.78	gold quality
rectum	UBERON:0001052	52.47	gold quality
blood	UBERON:0000178	52.43	gold quality
calcaneal tendon	UBERON:0003701	51.35	silver quality
placenta	UBERON:0001987	51.31	silver quality
lymph node	UBERON:0000029	51.30	gold quality
bone marrow	UBERON:0002371	51.20	gold quality
prefrontal cortex	UBERON:0000451	50.51	gold quality
liver	UBERON:0002107	50.15	gold quality
muscle of leg	UBERON:0001383	49.92	gold quality
islet of Langerhans	UBERON:0000006	49.21	gold quality
primary visual cortex	UBERON:0002436	49.00	gold quality
gastrocnemius	UBERON:0001388	48.91	gold quality
pancreas	UBERON:0001264	48.86	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	48.86	gold quality
descending thoracic aorta	UBERON:0002345	48.16	gold quality
gall bladder	UBERON:0002110	47.42	gold quality
left adrenal gland	UBERON:0001234	47.05	gold quality
adrenal gland	UBERON:0002369	46.78	gold quality
right coronary artery	UBERON:0001625	45.94	gold quality
frontal cortex	UBERON:0001870	45.87	gold quality
right lobe of liver	UBERON:0001114	45.67	silver quality
kidney	UBERON:0002113	45.47	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.