LINC01365

Summary

LINC01365 (long intergenic non-protein coding RNA 1365, HGNC:50603) is a long non-coding RNA gene on chromosome 4q26.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50603
Approved symbol	LINC01365
Name	long intergenic non-protein coding RNA 1365
Location	4q26
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250772
Ensembl biotype	lncRNA
Entrez	101927007
RNAcentral	URS00022AE808 — lncRNA, 545 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000503266, ENST00000512219, ENST00000669300, ENST00000770569

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503266 — 5 exons

Exon	Start	End
ENSE00002037510	119800637	119800762
ENSE00002051265	119802724	119802892
ENSE00002059514	119801352	119801394
ENSE00002086616	119799089	119799236
ENSE00003864807	119804452	119804554

Expression profiles

Bgee: expression breadth broad, 24 present calls, max score 98.85.

Top tissues by expression

161 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	98.85	gold quality
sperm	CL:0000019	81.44	silver quality
epithelium of nasopharynx	UBERON:0001951	73.56	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	72.27	gold quality
oocyte	CL:0000023	67.11	gold quality
mucosa of paranasal sinus	UBERON:0005030	66.26	gold quality
superficial temporal artery	UBERON:0001614	65.28	gold quality
saphenous vein	UBERON:0007318	65.07	gold quality
inferior vagus X ganglion	UBERON:0005363	64.92	gold quality
nipple	UBERON:0002030	64.76	gold quality
right testis	UBERON:0004534	64.39	gold quality
corpus callosum	UBERON:0002336	64.37	gold quality
ventral tegmental area	UBERON:0002691	64.32	gold quality
dorsal root ganglion	UBERON:0000044	64.09	gold quality
subthalamic nucleus	UBERON:0001906	64.09	gold quality
dorsal plus ventral thalamus	UBERON:0001897	63.85	gold quality
caecum	UBERON:0001153	63.78	gold quality
superior surface of tongue	UBERON:0007371	63.78	gold quality
cardiac atrium	UBERON:0002081	63.72	gold quality
adrenal cortex	UBERON:0001235	63.67	gold quality
pericardium	UBERON:0002407	63.64	gold quality
superior vestibular nucleus	UBERON:0007227	63.52	gold quality
nucleus accumbens	UBERON:0001882	63.48	gold quality
amygdala	UBERON:0001876	63.46	gold quality
cardia of stomach	UBERON:0001162	63.45	gold quality
spinal cord	UBERON:0002240	63.41	gold quality
thymus	UBERON:0002370	63.32	gold quality
medulla oblongata	UBERON:0001896	63.28	gold quality
tongue	UBERON:0001723	63.23	gold quality
pharyngeal mucosa	UBERON:0000355	63.18	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.