LINC01385

Summary

LINC01385 (long intergenic non-protein coding RNA 1385, HGNC:50657) is a long non-coding RNA gene on chromosome 5q13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50657
Approved symbol	LINC01385
Name	long intergenic non-protein coding RNA 1385
Location	5q13.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00009424
Ensembl gene	ENSG00000251604
Ensembl biotype	lncRNA
Entrez	106144542
RNAcentral	URS0002A36CF7 — lncRNA, 2172 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000512310, ENST00000814868, ENST00000814869, ENST00000814870, ENST00000814871

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000512310 — 3 exons

Exon	Start	End
ENSE00004216236	73451498	73452105
ENSE00004216243	73454026	73455291
ENSE00004216245	73453224	73453521

Expression profiles

Bgee: expression breadth broad, 26 present calls, max score 90.01.

Top tissues by expression

26 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.01	gold quality
stomach	UBERON:0000945	69.42	silver quality
stromal cell of endometrium	CL:0002255	53.44	silver quality
cortex of kidney	UBERON:0001225	49.39	silver quality
nucleus accumbens	UBERON:0001882	46.37	gold quality
subcutaneous adipose tissue	UBERON:0002190	45.63	silver quality
blood	UBERON:0000178	45.59	gold quality
thoracic aorta	UBERON:0001515	44.75	silver quality
putamen	UBERON:0001874	44.08	silver quality
adult mammalian kidney	UBERON:0000082	43.74	gold quality
lower esophagus muscularis layer	UBERON:0035833	42.35	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	41.29	gold quality
Ammon’s horn	UBERON:0001954	40.83	silver quality
hypothalamus	UBERON:0001898	40.38	silver quality
skin of abdomen	UBERON:0001416	39.73	silver quality
tibial nerve	UBERON:0001323	38.98	silver quality
tibial artery	UBERON:0007610	38.96	silver quality
gastrocnemius	UBERON:0001388	38.80	silver quality
substantia nigra	UBERON:0002038	38.24	silver quality
skin of leg	UBERON:0001511	38.10	silver quality
caudate nucleus	UBERON:0001873	37.73	silver quality
pituitary gland	UBERON:0000007	36.79	silver quality
small intestine Peyer’s patch	UBERON:0003454	35.20	silver quality
testis	UBERON:0000473	29.59	silver quality
right testis	UBERON:0004534	28.96	silver quality
left testis	UBERON:0004533	28.38	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.