LINC01418

Summary

LINC01418 (long intergenic non-protein coding RNA 1418, HGNC:50711) is a long non-coding RNA gene on chromosome 15q25.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50711
Approved symbol	LINC01418
Name	long intergenic non-protein coding RNA 1418
Location	15q25.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC104041.1
Ensembl gene	ENSG00000259692
Ensembl biotype	lncRNA
Entrez	102724001
RNAcentral	URS0000EF3170 — lncRNA, 2011 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 34 — 34 lncRNA

ENST00000559299, ENST00000559428, ENST00000560054, ENST00000560097, ENST00000657769, ENST00000664621, ENST00000668584, ENST00000829410, ENST00000829411, ENST00000829412, ENST00000829413, ENST00000829414, ENST00000829415, ENST00000829416, ENST00000829417, ENST00000829418, ENST00000829419, ENST00000829420, ENST00000829421, ENST00000829422, ENST00000829423, ENST00000829424, ENST00000829425, ENST00000829426, ENST00000829427, ENST00000829428, ENST00000829429, ENST00000829430, ENST00000829431, ENST00000829432, ENST00000829433, ENST00000829434, ENST00000829435, ENST00000829436

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000559299 — 8 exons

Exon	Start	End
ENSE00002541371	81995427	81995666
ENSE00002543317	81954389	81954469
ENSE00002574327	81953303	81953507
ENSE00003854283	81818325	81818379
ENSE00003854821	81915347	81915457
ENSE00003855565	81925673	81925743
ENSE00003876108	81925875	81926025
ENSE00003887668	81816761	81817857

Expression profiles

Bgee: expression breadth ubiquitous, 146 present calls, max score 88.12.

Top tissues by expression

231 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	88.12	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.09	gold quality
bone marrow cell	CL:0002092	75.15	gold quality
buccal mucosa cell	CL:0002336	68.02	silver quality
cortical plate	UBERON:0005343	67.97	gold quality
placenta	UBERON:0001987	62.61	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.79	gold quality
ganglionic eminence	UBERON:0004023	60.53	gold quality
ventricular zone	UBERON:0003053	59.93	silver quality
monocyte	CL:0000576	57.84	gold quality
leukocyte	CL:0000738	57.78	gold quality
lower esophagus mucosa	UBERON:0035834	56.89	gold quality
calcaneal tendon	UBERON:0003701	55.05	gold quality
uterine cervix	UBERON:0000002	54.67	gold quality
endocervix	UBERON:0000458	54.06	gold quality
islet of Langerhans	UBERON:0000006	52.65	gold quality
thyroid gland	UBERON:0002046	52.53	gold quality
stromal cell of endometrium	CL:0002255	52.41	silver quality
cortex of kidney	UBERON:0001225	52.34	gold quality
tonsil	UBERON:0002372	51.96	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.83	gold quality
left lobe of thyroid gland	UBERON:0001120	51.50	gold quality
ectocervix	UBERON:0012249	51.44	gold quality
urinary bladder	UBERON:0001255	50.74	gold quality
pancreas	UBERON:0001264	50.68	gold quality
lymph node	UBERON:0000029	50.64	gold quality
body of uterus	UBERON:0009853	50.54	gold quality
vagina	UBERON:0000996	50.53	gold quality
right lobe of thyroid gland	UBERON:0001119	50.36	gold quality
muscle of leg	UBERON:0001383	50.18	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.