LINC01429

Summary

LINC01429 (long intergenic non-protein coding RNA 1429, HGNC:50741) is a long non-coding RNA gene on chromosome 20q13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50741
Approved symbol	LINC01429
Name	long intergenic non-protein coding RNA 1429
Location	20q13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227964
Ensembl biotype	lncRNA
Entrez	101927678
RNAcentral	URS000075DB7B — lncRNA, 2327 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000438154

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000438154 — 3 exons

Exon	Start	End
ENSE00001704946	51831797	51833969
ENSE00001754186	51842685	51842749
ENSE00001798217	51862825	51862912

Expression profiles

Bgee: expression breadth broad, 25 present calls, max score 51.38.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1354 / max 12.9007, expressed in 71 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
187975	0.1019	65
187974	0.0335	17

Top tissues by expression

25 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
temporal lobe	UBERON:0001871	51.38	silver quality
heart left ventricle	UBERON:0002084	50.25	silver quality
esophagus	UBERON:0001043	49.19	gold quality
blood	UBERON:0000178	48.79	silver quality
bone marrow	UBERON:0002371	48.30	silver quality
colon	UBERON:0001155	47.23	silver quality
brain	UBERON:0000955	46.82	silver quality
anterior cingulate cortex	UBERON:0009835	45.90	silver quality
right lobe of liver	UBERON:0001114	45.14	silver quality
heart	UBERON:0000948	44.19	silver quality
placenta	UBERON:0001987	43.90	silver quality
gastrocnemius	UBERON:0001388	43.66	silver quality
left coronary artery	UBERON:0001626	41.38	silver quality
ascending aorta	UBERON:0001496	41.30	silver quality
gall bladder	UBERON:0002110	41.30	silver quality
subcutaneous adipose tissue	UBERON:0002190	39.33	silver quality
caudate nucleus	UBERON:0001873	39.20	silver quality
saliva-secreting gland	UBERON:0001044	39.05	silver quality
prostate gland	UBERON:0002367	38.09	silver quality
omental fat pad	UBERON:0010414	37.62	silver quality
right atrium auricular region	UBERON:0006631	37.43	silver quality
skin of leg	UBERON:0001511	37.27	silver quality
right frontal lobe	UBERON:0002810	37.06	silver quality
body of stomach	UBERON:0001161	36.90	silver quality
minor salivary gland	UBERON:0001830	34.29	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.