LINC01438

Summary

LINC01438 (long intergenic non-protein coding RNA 1438, HGNC:50757) is a long non-coding RNA gene on chromosome 4q25.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50757
Approved symbol	LINC01438
Name	long intergenic non-protein coding RNA 1438
Location	4q25
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00007593
Ensembl gene	ENSG00000249519
Ensembl biotype	lncRNA
Entrez	106144527
RNAcentral	URS0002A57985 — lncRNA, 619 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000512794, ENST00000754041

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000512794 — 2 exons

Exon	Start	End
ENSE00002036158	110794403	110794474
ENSE00002061398	110796861	110797344

Expression profiles

Bgee: expression breadth broad, 23 present calls, max score 83.65.

Top tissues by expression

23 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.65	silver quality
blood	UBERON:0000178	58.72	gold quality
placenta	UBERON:0001987	56.64	gold quality
urinary bladder	UBERON:0001255	55.07	gold quality
monocyte	CL:0000576	51.67	gold quality
muscle of leg	UBERON:0001383	51.40	gold quality
gastrocnemius	UBERON:0001388	49.20	gold quality
heart	UBERON:0000948	44.95	gold quality
adenohypophysis	UBERON:0002196	44.72	gold quality
minor salivary gland	UBERON:0001830	42.87	silver quality
right atrium auricular region	UBERON:0006631	42.14	gold quality
omental fat pad	UBERON:0010414	41.90	silver quality
lower esophagus muscularis layer	UBERON:0035833	41.04	silver quality
intestine	UBERON:0000160	41.01	silver quality
pituitary gland	UBERON:0000007	39.38	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	39.08	silver quality
right ovary	UBERON:0002118	38.43	silver quality
skin of abdomen	UBERON:0001416	38.26	silver quality
muscle layer of sigmoid colon	UBERON:0035805	36.88	silver quality
hypothalamus	UBERON:0001898	36.39	silver quality
anterior cingulate cortex	UBERON:0009835	34.24	silver quality
testis	UBERON:0000473	31.37	silver quality
left testis	UBERON:0004533	29.12	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.14

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.