LINC01442

Summary

LINC01442 (long intergenic non-protein coding RNA 1442, HGNC:50764) is a long non-coding RNA gene on chromosome 13q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50764
Approved symbol	LINC01442
Name	long intergenic non-protein coding RNA 1442
Location	13q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000227510
Ensembl biotype	lncRNA
Entrez	103456507
RNAcentral	URS00026A1BF8 — lncRNA, 1380 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000414201, ENST00000618872, ENST00000662397, ENST00000669007

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000414201 — 2 exons

Exon	Start	End
ENSE00001621990	60917042	60917238
ENSE00003538160	60919813	60920319

Expression profiles

Bgee: expression breadth broad, 72 present calls, max score 69.41.

Top tissues by expression

175 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	69.41	silver quality
sural nerve	UBERON:0015488	59.18	silver quality
left testis	UBERON:0004533	55.13	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.80	silver quality
right testis	UBERON:0004534	54.78	gold quality
testis	UBERON:0000473	54.03	gold quality
monocyte	CL:0000576	50.60	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	49.66	gold quality
right lobe of liver	UBERON:0001114	49.53	silver quality
islet of Langerhans	UBERON:0000006	48.64	gold quality
muscle of leg	UBERON:0001383	48.22	gold quality
upper leg skin	UBERON:0004262	47.45	silver quality
gastrocnemius	UBERON:0001388	47.10	gold quality
prefrontal cortex	UBERON:0000451	46.23	silver quality
smooth muscle tissue	UBERON:0001135	46.14	silver quality
calcaneal tendon	UBERON:0003701	45.87	silver quality
skin of hip	UBERON:0001554	45.66	silver quality
corpus callosum	UBERON:0002336	45.32	silver quality
cerebellar cortex	UBERON:0002129	44.92	silver quality
right hemisphere of cerebellum	UBERON:0014890	44.86	gold quality
tibial nerve	UBERON:0001323	44.75	gold quality
spleen	UBERON:0002106	44.46	silver quality
primary visual cortex	UBERON:0002436	44.22	silver quality
cerebellar hemisphere	UBERON:0002245	44.14	silver quality
amygdala	UBERON:0001876	44.06	gold quality
Brodmann (1909) area 9	UBERON:0013540	43.51	silver quality
body of pancreas	UBERON:0001150	43.42	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
nucleus accumbens	UBERON:0001882	43.14	gold quality
cerebellum	UBERON:0002037	43.07	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.