LINC01443

Summary

LINC01443 (long intergenic non-protein coding RNA 1443, HGNC:50768) is a long non-coding RNA gene on chromosome 18p11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50768
Approved symbol	LINC01443
Name	long intergenic non-protein coding RNA 1443
Location	18p11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000266554
Ensembl biotype	lncRNA
Entrez	400644
RNAcentral	URS000075C2FF — lncRNA, 1871 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000580967, ENST00000584531, ENST00000647999, ENST00000737784

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000580967 — 2 exons

Exon	Start	End
ENSE00002700856	14972378	14973770
ENSE00002711743	14971497	14971886

Expression profiles

Bgee: expression breadth broad, 89 present calls, max score 58.41.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0191 / max 13.2247, expressed in 4 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
169588	0.0153	3
208511	0.0038	2

Top tissues by expression

89 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cortical plate	UBERON:0005343	58.41	silver quality
cortex of kidney	UBERON:0001225	57.78	gold quality
small intestine Peyer’s patch	UBERON:0003454	57.16	gold quality
small intestine	UBERON:0002108	57.01	gold quality
rectum	UBERON:0001052	54.72	gold quality
urinary bladder	UBERON:0001255	53.93	gold quality
intestine	UBERON:0000160	52.70	gold quality
vermiform appendix	UBERON:0001154	52.36	gold quality
transverse colon	UBERON:0001157	52.36	gold quality
left lobe of thyroid gland	UBERON:0001120	51.96	gold quality
hindlimb stylopod muscle	UBERON:0004252	51.90	silver quality
thyroid gland	UBERON:0002046	51.78	gold quality
right lobe of thyroid gland	UBERON:0001119	51.43	gold quality
muscle tissue	UBERON:0002385	50.90	gold quality
colon	UBERON:0001155	50.32	gold quality
spleen	UBERON:0002106	49.72	gold quality
kidney	UBERON:0002113	49.66	gold quality
duodenum	UBERON:0002114	49.36	gold quality
hypothalamus	UBERON:0001898	48.81	gold quality
blood	UBERON:0000178	48.73	silver quality
calcaneal tendon	UBERON:0003701	48.57	silver quality
primary visual cortex	UBERON:0002436	48.18	silver quality
adult mammalian kidney	UBERON:0000082	48.04	gold quality
prefrontal cortex	UBERON:0000451	47.25	silver quality
pancreas	UBERON:0001264	46.96	silver quality
myometrium	UBERON:0001296	46.85	silver quality
multicellular organism	UBERON:0000468	46.36	gold quality
superior frontal gyrus	UBERON:0002661	46.29	silver quality
muscle of leg	UBERON:0001383	46.18	silver quality
right hemisphere of cerebellum	UBERON:0014890	45.92	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.