LINC01444

Summary

LINC01444 (long intergenic non-protein coding RNA 1444, HGNC:50769) is a long non-coding RNA gene on chromosome 18p11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50769
Approved symbol	LINC01444
Name	long intergenic non-protein coding RNA 1444
Location	18p11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000264301
Ensembl biotype	lncRNA
Entrez	101927642
RNAcentral	URS000075CED7 — lncRNA, 763 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000580867, ENST00000581211, ENST00000737861, ENST00000737862

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000580867 — 2 exons

Exon	Start	End
ENSE00004072577	14969878	14970468
ENSE00004072579	14969602	14969778

Expression profiles

Bgee: expression breadth broad, 81 present calls, max score 66.36.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1346 / max 27.0525, expressed in 50 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
171296	0.0630	26
171297	0.0539	29
171295	0.0177	6

Top tissues by expression

81 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left lobe of thyroid gland	UBERON:0001120	66.36	gold quality
thyroid gland	UBERON:0002046	66.25	gold quality
right lobe of thyroid gland	UBERON:0001119	66.05	gold quality
cortex of kidney	UBERON:0001225	64.12	gold quality
liver	UBERON:0002107	56.75	silver quality
islet of Langerhans	UBERON:0000006	55.57	gold quality
spleen	UBERON:0002106	53.87	gold quality
superior frontal gyrus	UBERON:0002661	53.87	gold quality
monocyte	CL:0000576	53.46	silver quality
lymph node	UBERON:0000029	53.06	gold quality
small intestine Peyer’s patch	UBERON:0003454	52.81	gold quality
small intestine	UBERON:0002108	52.76	gold quality
placenta	UBERON:0001987	49.60	gold quality
body of uterus	UBERON:0009853	49.39	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.13	gold quality
multicellular organism	UBERON:0000468	48.89	gold quality
transverse colon	UBERON:0001157	48.50	gold quality
prefrontal cortex	UBERON:0000451	48.17	gold quality
rectum	UBERON:0001052	47.86	gold quality
colon	UBERON:0001155	47.84	gold quality
blood	UBERON:0000178	47.48	silver quality
myometrium	UBERON:0001296	46.93	gold quality
right adrenal gland	UBERON:0001233	46.24	gold quality
adult mammalian kidney	UBERON:0000082	46.21	gold quality
muscle layer of sigmoid colon	UBERON:0035805	45.92	gold quality
adrenal gland	UBERON:0002369	45.87	gold quality
right adrenal gland cortex	UBERON:0035827	45.76	gold quality
tibial artery	UBERON:0007610	45.67	gold quality
popliteal artery	UBERON:0002250	45.55	gold quality
left adrenal gland	UBERON:0001234	45.43	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.