LINC01456

Summary

LINC01456 (long intergenic non-protein coding RNA 1456, HGNC:50846) is a long non-coding RNA gene on chromosome Xp22.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:50846
Approved symbol	LINC01456
Name	long intergenic non-protein coding RNA 1456
Location	Xp22.13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225882
Ensembl biotype	lncRNA
Entrez	105373144
RNAcentral	URS00008E399F — lncRNA, 732 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000453902, ENST00000844921, ENST00000844922, ENST00000844923, ENST00000844924, ENST00000844925, ENST00000844926, ENST00000844927, ENST00000844928, ENST00000844929, ENST00000844930, ENST00000844931, ENST00000844932, ENST00000844933, ENST00000844934, ENST00000844935, ENST00000844936, ENST00000844937

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000453902 — 5 exons

Exon	Start	End
ENSE00001621672	17982491	17982601
ENSE00001650814	17970197	17970430
ENSE00001708967	17995789	17995888
ENSE00001762227	17971987	17972155
ENSE00001793563	18104551	18104644

Expression profiles

Bgee: expression breadth broad, 60 present calls, max score 86.80.

Top tissues by expression

60 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.80	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.89	silver quality
cortical plate	UBERON:0005343	69.15	gold quality
liver	UBERON:0002107	66.15	silver quality
ganglionic eminence	UBERON:0004023	65.02	gold quality
sural nerve	UBERON:0015488	62.86	silver quality
right adrenal gland cortex	UBERON:0035827	58.81	gold quality
placenta	UBERON:0001987	57.41	gold quality
right uterine tube	UBERON:0001302	56.32	gold quality
blood	UBERON:0000178	54.07	silver quality
right atrium auricular region	UBERON:0006631	52.35	gold quality
prefrontal cortex	UBERON:0000451	52.30	gold quality
tibial nerve	UBERON:0001323	52.02	silver quality
islet of Langerhans	UBERON:0000006	51.95	gold quality
right adrenal gland	UBERON:0001233	50.52	gold quality
fallopian tube	UBERON:0003889	49.05	gold quality
left adrenal gland cortex	UBERON:0035825	48.83	gold quality
heart	UBERON:0000948	48.74	gold quality
minor salivary gland	UBERON:0001830	47.46	gold quality
muscle of leg	UBERON:0001383	47.31	silver quality
gastrocnemius	UBERON:0001388	46.65	silver quality
prostate gland	UBERON:0002367	46.34	gold quality
heart left ventricle	UBERON:0002084	45.82	gold quality
body of pancreas	UBERON:0001150	45.31	silver quality
body of stomach	UBERON:0001161	45.21	gold quality
left lobe of thyroid gland	UBERON:0001120	44.89	gold quality
spleen	UBERON:0002106	44.55	silver quality
multicellular organism	UBERON:0000468	44.52	gold quality
Ammon’s horn	UBERON:0001954	44.37	silver quality
nucleus accumbens	UBERON:0001882	44.10	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.