LINC01482

Summary

LINC01482 (long intergenic non-protein coding RNA 1482, HGNC:51128) is a long non-coding RNA gene on chromosome 17q24.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51128
Approved symbol	LINC01482
Name	long intergenic non-protein coding RNA 1482
Location	17q24.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267659
Ensembl biotype	lncRNA
Entrez	101928104
RNAcentral	URS00002FCCB1 — lncRNA, 2616 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000585484, ENST00000587999, ENST00000589610, ENST00000591754, ENST00000792224, ENST00000792789, ENST00000792790, ENST00000792791, ENST00000792792, ENST00000792793

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000585484 — 5 exons

Exon	Start	End
ENSE00002737975	68676949	68677365
ENSE00002830515	68672113	68672166
ENSE00002879769	68628154	68628186
ENSE00002915024	68642670	68642765
ENSE00002956119	68677591	68679606

Expression profiles

Bgee: expression breadth ubiquitous, 142 present calls, max score 88.46.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1159 / max 92.6563, expressed in 13 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
162449	0.0450	5
162447	0.0308	5
162450	0.0275	4
162448	0.0126	3

Top tissues by expression

266 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pancreatic ductal cell	CL:0002079	88.46	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.89	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.06	gold quality
right lobe of liver	UBERON:0001114	67.14	gold quality
cervix squamous epithelium	UBERON:0006922	65.97	gold quality
parotid gland	UBERON:0001831	65.73	gold quality
ventricular zone	UBERON:0003053	64.63	gold quality
sural nerve	UBERON:0015488	64.14	silver quality
tonsil	UBERON:0002372	64.10	gold quality
colonic epithelium	UBERON:0000397	63.51	silver quality
ileal mucosa	UBERON:0000331	62.80	silver quality
tibialis anterior	UBERON:0001385	61.83	silver quality
liver	UBERON:0002107	61.18	gold quality
gluteal muscle	UBERON:0002000	60.23	gold quality
triceps brachii	UBERON:0001509	60.18	gold quality
saliva-secreting gland	UBERON:0001044	59.64	gold quality
diaphragm	UBERON:0001103	59.06	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	57.23	gold quality
monocyte	CL:0000576	56.63	gold quality
mononuclear cell	CL:0000842	56.45	gold quality
minor salivary gland	UBERON:0001830	56.41	gold quality
uterine cervix	UBERON:0000002	56.38	gold quality
body of uterus	UBERON:0009853	56.33	gold quality
endocervix	UBERON:0000458	56.29	gold quality
smooth muscle tissue	UBERON:0001135	55.51	gold quality
left ovary	UBERON:0002119	55.32	gold quality
ectocervix	UBERON:0012249	54.84	gold quality
islet of Langerhans	UBERON:0000006	54.68	gold quality
mouth mucosa	UBERON:0003729	54.35	gold quality
right ovary	UBERON:0002118	54.18	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 2.

Experiment	Marker?	Max mean expression
E-CURD-119	yes	24.42
E-ANND-3	yes	6.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.