LINC01485

Summary

LINC01485 (long intergenic non-protein coding RNA 1485, HGNC:51138) is a long non-coding RNA gene on chromosome 5q35.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51138
Approved symbol	LINC01485
Name	long intergenic non-protein coding RNA 1485
Location	5q35.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254211
Ensembl biotype	lncRNA
Entrez	101928154
RNAcentral	URS000075ACAB — lncRNA, 741 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000518675, ENST00000520324, ENST00000522571, ENST00000522731, ENST00000523617, ENST00000653465, ENST00000659366, ENST00000662807, ENST00000732698, ENST00000732699, ENST00000732700, ENST00000732701

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000518675 — 2 exons

Exon	Start	End
ENSE00002100905	173790809	173790870
ENSE00002116868	173808730	173809039

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 95.48.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1304 / max 25.7677, expressed in 38 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
64976	0.0862	33
64975	0.0285	11
64977	0.0156	8

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right lobe of liver	UBERON:0001114	95.48	gold quality
liver	UBERON:0002107	95.10	gold quality
right adrenal gland	UBERON:0001233	91.21	gold quality
right adrenal gland cortex	UBERON:0035827	90.97	gold quality
left adrenal gland cortex	UBERON:0035825	90.03	gold quality
left adrenal gland	UBERON:0001234	89.65	gold quality
adrenal gland	UBERON:0002369	87.85	gold quality
adrenal tissue	UBERON:0018303	81.20	gold quality
omental fat pad	UBERON:0010414	79.41	gold quality
putamen	UBERON:0001874	77.47	gold quality
adipose tissue	UBERON:0001013	76.87	gold quality
nucleus accumbens	UBERON:0001882	75.40	gold quality
thoracic mammary gland	UBERON:0005200	75.28	gold quality
subcutaneous adipose tissue	UBERON:0002190	74.52	gold quality
caudate nucleus	UBERON:0001873	74.50	gold quality
colonic epithelium	UBERON:0000397	73.34	gold quality
substantia nigra	UBERON:0002038	72.87	gold quality
adult mammalian kidney	UBERON:0000082	72.19	gold quality
hypothalamus	UBERON:0001898	71.98	gold quality
kidney	UBERON:0002113	71.33	gold quality
cortical plate	UBERON:0005343	70.90	gold quality
bone marrow cell	CL:0002092	70.67	gold quality
sural nerve	UBERON:0015488	70.55	gold quality
ganglionic eminence	UBERON:0004023	69.53	gold quality
left coronary artery	UBERON:0001626	66.63	gold quality
temporal lobe	UBERON:0001871	66.27	gold quality
amygdala	UBERON:0001876	66.18	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.82	gold quality
Ammon’s horn	UBERON:0001954	65.66	gold quality
anterior cingulate cortex	UBERON:0009835	65.09	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.40

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 2)

• Super-Enhancer-Associated Long Non-Coding RNA LINC01485 Promotes Osteogenic Differentiation of Human Bone Marrow Mesenchymal Stem Cells by Regulating MiR-619-5p/RUNX2 Axis. (PMID:35663324)
• LINC01485 contributes to colorectal cancer progression by targeting miR-383-5p/KRT80 axis. (PMID:37782686)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.