LINC01492

Summary

LINC01492 (long intergenic non-protein coding RNA 1492, HGNC:51149) is a long non-coding RNA gene on chromosome 9q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51149
Approved symbol	LINC01492
Name	long intergenic non-protein coding RNA 1492
Location	9q31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225564
Ensembl biotype	lncRNA
Entrez	101928496
RNAcentral	URS000075CF6A — lncRNA, 3732 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000411575, ENST00000425157, ENST00000455051, ENST00000806271, ENST00000806272, ENST00000806273, ENST00000806274, ENST00000806275, ENST00000806276, ENST00000806277, ENST00000806278, ENST00000806279

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411575 — 10 exons

Exon	Start	End
ENSE00001603351	103144311	103144366
ENSE00001608796	103140523	103143263
ENSE00001613962	103227714	103227811
ENSE00001618569	103264524	103264650
ENSE00001626666	103320014	103320186
ENSE00001643920	103324991	103325034
ENSE00001658173	103277330	103277499
ENSE00001662984	103315142	103315281
ENSE00001700774	103276031	103276148
ENSE00001736498	103188046	103188116

Expression profiles

Bgee: expression breadth broad, 59 present calls, max score 75.34.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0146 / max 15.7880, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
101774	0.0146	3

Top tissues by expression

172 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.34	silver quality
right testis	UBERON:0004534	71.16	gold quality
left testis	UBERON:0004533	69.93	gold quality
testis	UBERON:0000473	67.84	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.70	gold quality
ganglionic eminence	UBERON:0004023	59.52	silver quality
gall bladder	UBERON:0002110	54.47	gold quality
buccal mucosa cell	CL:0002336	52.22	gold quality
monocyte	CL:0000576	50.82	silver quality
islet of Langerhans	UBERON:0000006	50.07	gold quality
muscle of leg	UBERON:0001383	47.63	gold quality
gastrocnemius	UBERON:0001388	47.31	gold quality
body of pancreas	UBERON:0001150	47.02	gold quality
lower lobe of lung	UBERON:0008949	46.65	silver quality
rectum	UBERON:0001052	45.84	gold quality
lymph node	UBERON:0000029	45.25	gold quality
prefrontal cortex	UBERON:0000451	44.76	silver quality
skin of hip	UBERON:0001554	44.67	silver quality
tibial nerve	UBERON:0001323	44.33	gold quality
pancreas	UBERON:0001264	44.18	silver quality
upper lobe of lung	UBERON:0008948	43.90	silver quality
anatomical system	UBERON:0000467	43.84	gold quality
heart left ventricle	UBERON:0002084	43.84	silver quality
multicellular organism	UBERON:0000468	43.61	gold quality
material anatomical entity	UBERON:0000465	43.59	gold quality
tibial artery	UBERON:0007610	43.58	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
blood	UBERON:0000178	43.34	gold quality
ascending aorta	UBERON:0001496	43.22	gold quality
aorta	UBERON:0000947	43.08	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.71

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.