LINC01496

Summary

LINC01496 (long intergenic non-protein coding RNA 1496, HGNC:51162) is a long non-coding RNA gene on chromosome Xp11.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51162
Approved symbol	LINC01496
Name	long intergenic non-protein coding RNA 1496
Location	Xp11.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000234766
Ensembl biotype	lncRNA
Entrez	102723426
RNAcentral	URS000075EAD3 — lncRNA, 543 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000448761, ENST00000656579, ENST00000827922, ENST00000827923, ENST00000827924, ENST00000827925

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000448761 — 4 exons

Exon	Start	End
ENSE00001732645	51505881	51505969
ENSE00001755082	51505732	51505793
ENSE00004240332	51502016	51502340
ENSE00004240340	51510948	51511203

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 69.84.

Top tissues by expression

105 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right testis	UBERON:0004534	69.84	gold quality
testis	UBERON:0000473	67.16	gold quality
left testis	UBERON:0004533	66.30	gold quality
muscle tissue	UBERON:0002385	61.41	gold quality
tonsil	UBERON:0002372	60.86	gold quality
gall bladder	UBERON:0002110	60.17	gold quality
ventricular zone	UBERON:0003053	58.78	silver quality
lymph node	UBERON:0000029	58.28	gold quality
urinary bladder	UBERON:0001255	57.42	gold quality
cortical plate	UBERON:0005343	55.88	silver quality
vermiform appendix	UBERON:0001154	54.98	gold quality
smooth muscle tissue	UBERON:0001135	54.21	gold quality
prefrontal cortex	UBERON:0000451	53.16	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	52.88	gold quality
blood	UBERON:0000178	52.66	gold quality
liver	UBERON:0002107	52.32	gold quality
adenohypophysis	UBERON:0002196	52.12	gold quality
right lobe of liver	UBERON:0001114	52.01	gold quality
frontal cortex	UBERON:0001870	50.95	gold quality
pituitary gland	UBERON:0000007	50.66	gold quality
superior frontal gyrus	UBERON:0002661	50.60	gold quality
stromal cell of endometrium	CL:0002255	50.50	silver quality
anterior cingulate cortex	UBERON:0009835	49.53	gold quality
cerebral cortex	UBERON:0000956	49.47	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	49.29	gold quality
heart left ventricle	UBERON:0002084	49.01	gold quality
gastrocnemius	UBERON:0001388	48.93	gold quality
multicellular organism	UBERON:0000468	48.70	gold quality
right frontal lobe	UBERON:0002810	48.60	gold quality
islet of Langerhans	UBERON:0000006	48.38	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.