LINC01511

Summary

LINC01511 (long intergenic non-protein coding RNA 1511, HGNC:51200) is a long non-coding RNA gene on chromosome 5p15.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51200
Approved symbol	LINC01511
Name	long intergenic non-protein coding RNA 1511
Location	5p15.33
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-325I22.2
Ensembl gene	ENSG00000250584
Ensembl biotype	lncRNA
Entrez	100506791
RNAcentral	URS00007E35AB — lncRNA, 1622 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000503067, ENST00000504989, ENST00000523692, ENST00000653645, ENST00000667031, ENST00000668064, ENST00000670452

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503067 — 2 exons

Exon	Start	End
ENSE00002069051	1364114	1364691
ENSE00002075003	1368320	1368395

Expression profiles

Bgee: expression breadth broad, 92 present calls, max score 88.80.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1360 / max 40.7348, expressed in 48 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
60775	0.1360	48

Top tissues by expression

92 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.80	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.05	gold quality
testis	UBERON:0000473	70.84	gold quality
right testis	UBERON:0004534	70.73	gold quality
left testis	UBERON:0004533	69.17	gold quality
superior frontal gyrus	UBERON:0002661	68.14	gold quality
prefrontal cortex	UBERON:0000451	66.67	gold quality
frontal cortex	UBERON:0001870	66.25	gold quality
right frontal lobe	UBERON:0002810	65.15	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	64.51	gold quality
primary visual cortex	UBERON:0002436	63.98	gold quality
Brodmann (1909) area 9	UBERON:0013540	63.96	gold quality
cerebral cortex	UBERON:0000956	62.19	gold quality
ventricular zone	UBERON:0003053	59.29	silver quality
right ovary	UBERON:0002118	59.26	gold quality
anterior cingulate cortex	UBERON:0009835	58.28	gold quality
right hemisphere of cerebellum	UBERON:0014890	57.83	gold quality
skeletal muscle tissue	UBERON:0001134	56.66	silver quality
hindlimb stylopod muscle	UBERON:0004252	56.00	silver quality
brain	UBERON:0000955	55.78	gold quality
monocyte	CL:0000576	54.83	gold quality
lymph node	UBERON:0000029	53.22	silver quality
multicellular organism	UBERON:0000468	52.79	gold quality
bone marrow	UBERON:0002371	51.71	gold quality
temporal lobe	UBERON:0001871	51.63	gold quality
amygdala	UBERON:0001876	51.29	gold quality
ovary	UBERON:0000992	50.17	gold quality
putamen	UBERON:0001874	49.54	gold quality
blood	UBERON:0000178	49.48	gold quality
myometrium	UBERON:0001296	49.29	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.