LINC01520

Summary

LINC01520 (long intergenic non-protein coding RNA 1520, HGNC:51218) is a long non-coding RNA gene on chromosome 10q23.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51218
Approved symbol	LINC01520
Name	long intergenic non-protein coding RNA 1520
Location	10q23.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000230962
Ensembl biotype	lncRNA
Entrez	101929684
RNAcentral	URS000075B6C0 — lncRNA, 1504 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000441457, ENST00000652859, ENST00000659541

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441457 — 6 exons

Exon	Start	End
ENSE00001594363	85449592	85450176
ENSE00001617526	85461596	85461697
ENSE00001653407	85451401	85451721
ENSE00001724056	85452871	85453070
ENSE00001736196	85478011	85478117
ENSE00001791803	85491825	85491996

Expression profiles

Bgee: expression breadth tissue_specific, 7 present calls, max score 50.56.

Top tissues by expression

160 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
upper leg skin	UBERON:0004262	50.56	silver quality
sperm	CL:0000019	50.52	gold quality
skin of hip	UBERON:0001554	48.71	gold quality
Brodmann (1909) area 9	UBERON:0013540	43.68	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
blood	UBERON:0000178	42.08	gold quality
pancreas	UBERON:0001264	42.02	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality
superficial temporal artery	UBERON:0001614	41.33	gold quality
cardiac ventricle	UBERON:0002082	41.15	gold quality
bone marrow	UBERON:0002371	41.14	gold quality
skeletal muscle tissue	UBERON:0001134	41.10	gold quality
palpebral conjunctiva	UBERON:0001812	41.10	gold quality
adrenal gland	UBERON:0002369	41.10	gold quality
mucosa of paranasal sinus	UBERON:0005030	40.98	gold quality
heart	UBERON:0000948	40.92	gold quality
kidney	UBERON:0002113	40.70	gold quality
amniotic fluid	UBERON:0000173	40.69	gold quality
nasal cavity mucosa	UBERON:0001826	40.63	gold quality
jejunal mucosa	UBERON:0000399	40.59	gold quality
endometrium	UBERON:0001295	40.57	gold quality
biceps brachii	UBERON:0001507	40.57	gold quality
adipose tissue	UBERON:0001013	40.53	gold quality
thyroid gland	UBERON:0002046	40.46	gold quality
epithelium of nasopharynx	UBERON:0001951	40.45	gold quality
myocardium	UBERON:0002349	40.45	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.