LINC01532

Summary

LINC01532 (long intergenic non-protein coding RNA 1532, HGNC:51272) is a long non-coding RNA gene on chromosome 19q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51272
Approved symbol	LINC01532
Name	long intergenic non-protein coding RNA 1532
Location	19q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267014
Ensembl biotype	lncRNA
Entrez	100505835
RNAcentral	URS0000293941 — lncRNA, 1948 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000589821, ENST00000591143, ENST00000592653, ENST00000656059, ENST00000659147, ENST00000661114, ENST00000663054, ENST00000667583, ENST00000668941, ENST00000777613, ENST00000777614

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000589821 — 4 exons

Exon	Start	End
ENSE00002813313	29010731	29010946
ENSE00002861586	29003602	29003740
ENSE00004146442	29002486	29002623
ENSE00004146446	29012511	29012870

Expression profiles

Bgee: expression breadth ubiquitous, 136 present calls, max score 84.83.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.5467 / max 81.5716, expressed in 77 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
174990	0.4177	74
174991	0.1291	37

Top tissues by expression

226 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
hypothalamus	UBERON:0001898	84.83	gold quality
right hemisphere of cerebellum	UBERON:0014890	82.95	gold quality
cerebellar hemisphere	UBERON:0002245	81.14	gold quality
cerebellar cortex	UBERON:0002129	81.13	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	80.85	gold quality
substantia nigra	UBERON:0002038	80.57	gold quality
cerebellum	UBERON:0002037	79.35	gold quality
spinal cord	UBERON:0002240	78.58	gold quality
midbrain	UBERON:0001891	76.61	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.35	silver quality
putamen	UBERON:0001874	75.49	gold quality
caudate nucleus	UBERON:0001873	73.82	gold quality
amygdala	UBERON:0001876	73.25	gold quality
nucleus accumbens	UBERON:0001882	72.50	gold quality
medial globus pallidus	UBERON:0002477	72.41	silver quality
cortical plate	UBERON:0005343	70.72	gold quality
hindlimb stylopod muscle	UBERON:0004252	68.33	gold quality
right uterine tube	UBERON:0001302	68.23	gold quality
anterior cingulate cortex	UBERON:0009835	68.19	gold quality
globus pallidus	UBERON:0001875	68.04	silver quality
ganglionic eminence	UBERON:0004023	67.61	gold quality
right frontal lobe	UBERON:0002810	66.36	gold quality
brain	UBERON:0000955	66.02	gold quality
prefrontal cortex	UBERON:0000451	64.72	gold quality
ectocervix	UBERON:0012249	64.24	gold quality
forebrain	UBERON:0001890	63.76	gold quality
adult mammalian kidney	UBERON:0000082	63.14	gold quality
Brodmann (1909) area 9	UBERON:0013540	63.11	gold quality
neocortex	UBERON:0001950	61.83	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	61.58	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.