LINC01556

Summary

LINC01556 (long intergenic non-protein coding RNA 1556, HGNC:21195) is a long non-coding RNA gene on chromosome 6p22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:21195
Approved symbol	LINC01556
Name	long intergenic non-protein coding RNA 1556
Location	6p22.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	dJ25J6.5
Ensembl gene	ENSG00000204709
Ensembl biotype	lncRNA
Entrez	729583
RNAcentral	URS000075BE0B — lncRNA, 770 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000377186, ENST00000824165, ENST00000824166, ENST00000824167, ENST00000824168

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000377186 — 2 exons

Exon	Start	End
ENSE00004233141	28943717	28944026
ENSE00004233146	28944222	28944717

Expression profiles

Bgee: expression breadth ubiquitous, 109 present calls, max score 60.89.

Top tissues by expression

109 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
placenta	UBERON:0001987	60.89	gold quality
skeletal muscle tissue	UBERON:0001134	60.65	gold quality
bone marrow	UBERON:0002371	59.10	gold quality
apex of heart	UBERON:0002098	58.49	gold quality
islet of Langerhans	UBERON:0000006	57.11	gold quality
gall bladder	UBERON:0002110	57.06	gold quality
duodenum	UBERON:0002114	56.59	gold quality
muscle tissue	UBERON:0002385	56.19	gold quality
prefrontal cortex	UBERON:0000451	55.87	gold quality
monocyte	CL:0000576	55.15	gold quality
vermiform appendix	UBERON:0001154	54.66	gold quality
primary visual cortex	UBERON:0002436	54.40	gold quality
right uterine tube	UBERON:0001302	53.96	gold quality
descending thoracic aorta	UBERON:0002345	53.95	gold quality
urinary bladder	UBERON:0001255	53.73	gold quality
rectum	UBERON:0001052	53.44	gold quality
lymph node	UBERON:0000029	52.95	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	52.85	gold quality
blood	UBERON:0000178	52.58	silver quality
tibial artery	UBERON:0007610	52.32	gold quality
popliteal artery	UBERON:0002250	52.31	gold quality
left coronary artery	UBERON:0001626	51.68	gold quality
muscle of leg	UBERON:0001383	51.19	gold quality
left adrenal gland cortex	UBERON:0035825	50.63	gold quality
thoracic aorta	UBERON:0001515	50.51	gold quality
ascending aorta	UBERON:0001496	50.40	gold quality
liver	UBERON:0002107	50.37	silver quality
calcaneal tendon	UBERON:0003701	50.25	silver quality
left testis	UBERON:0004533	49.56	gold quality
heart	UBERON:0000948	49.37	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.