LINC01570

Summary

LINC01570 (long intergenic non-protein coding RNA 1570, HGNC:51382) is a long non-coding RNA gene on chromosome 16p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51382
Approved symbol	LINC01570
Name	long intergenic non-protein coding RNA 1570
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260338
Ensembl biotype	lncRNA
Entrez	101926950
RNAcentral	URS000075ABF5 — lncRNA, 786 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000561572, ENST00000566218, ENST00000653860, ENST00000656878, ENST00000662976

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000561572 — 3 exons

Exon	Start	End
ENSE00002600920	5609912	5610674
ENSE00002614730	5611235	5611399
ENSE00003878118	5616102	5616274

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 79.36.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0394 / max 30.6738, expressed in 5 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
156148	0.0310	3
156149	0.0064	5
156150	0.0021	1

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	79.36	gold quality
testis	UBERON:0000473	78.94	gold quality
right testis	UBERON:0004534	78.91	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	72.37	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.16	silver quality
hindlimb stylopod muscle	UBERON:0004252	59.30	silver quality
skeletal muscle tissue	UBERON:0001134	54.33	silver quality
stromal cell of endometrium	CL:0002255	53.20	silver quality
monocyte	CL:0000576	52.84	silver quality
duodenum	UBERON:0002114	50.30	gold quality
liver	UBERON:0002107	50.10	gold quality
bone marrow	UBERON:0002371	49.59	silver quality
prefrontal cortex	UBERON:0000451	49.38	gold quality
blood	UBERON:0000178	48.85	silver quality
islet of Langerhans	UBERON:0000006	48.59	silver quality
corpus callosum	UBERON:0002336	48.37	silver quality
calcaneal tendon	UBERON:0003701	48.34	silver quality
smooth muscle tissue	UBERON:0001135	48.24	gold quality
adrenal tissue	UBERON:0018303	48.18	silver quality
muscle of leg	UBERON:0001383	48.13	gold quality
right lobe of liver	UBERON:0001114	47.72	silver quality
gastrocnemius	UBERON:0001388	47.28	gold quality
adult mammalian kidney	UBERON:0000082	47.11	gold quality
superior frontal gyrus	UBERON:0002661	46.98	silver quality
lymph node	UBERON:0000029	46.73	silver quality
vermiform appendix	UBERON:0001154	46.64	silver quality
adenohypophysis	UBERON:0002196	46.16	gold quality
multicellular organism	UBERON:0000468	46.10	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	45.41	silver quality
uterine cervix	UBERON:0000002	45.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.