LINC01584

Summary

LINC01584 (long intergenic non-protein coding RNA 1584, HGNC:51426) is a long non-coding RNA gene on chromosome 15q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51426
Approved symbol	LINC01584
Name	long intergenic non-protein coding RNA 1584
Location	15q25.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00024001
Ensembl gene	ENSG00000260477
Ensembl biotype	lncRNA
Entrez	101929701
RNAcentral	URS000075BF11 — lncRNA, 863 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 38 — 38 lncRNA

ENST00000562495, ENST00000563990, ENST00000567231, ENST00000567981, ENST00000570008, ENST00000653333, ENST00000653563, ENST00000654064, ENST00000655250, ENST00000655711, ENST00000655989, ENST00000656269, ENST00000657080, ENST00000657460, ENST00000657762, ENST00000658786, ENST00000660161, ENST00000660478, ENST00000661185, ENST00000661228, ENST00000661993, ENST00000662657, ENST00000662763, ENST00000663008, ENST00000663547, ENST00000663821, ENST00000664634, ENST00000668270, ENST00000668761, ENST00000669223, ENST00000670124, ENST00000670539, ENST00000670766, ENST00000671552, ENST00000797260, ENST00000797261, ENST00000797262, ENST00000797263

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562495 — 7 exons

Exon	Start	End
ENSE00002586574	86088304	86088343
ENSE00002592603	86107535	86107654
ENSE00002614555	86079764	86079961
ENSE00002624678	86086250	86086373
ENSE00002628775	86078809	86079052
ENSE00003800480	86080166	86080288
ENSE00003880284	86116581	86116724

Expression profiles

Bgee: expression breadth broad, 95 present calls, max score 90.81.

Top tissues by expression

95 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.81	gold quality
left testis	UBERON:0004533	74.61	gold quality
right testis	UBERON:0004534	74.51	gold quality
testis	UBERON:0000473	74.45	gold quality
skeletal muscle tissue	UBERON:0001134	67.35	gold quality
hindlimb stylopod muscle	UBERON:0004252	66.57	gold quality
adrenal tissue	UBERON:0018303	63.94	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	63.00	gold quality
cortex of kidney	UBERON:0001225	58.41	gold quality
monocyte	CL:0000576	56.99	gold quality
bone marrow	UBERON:0002371	56.20	gold quality
muscle of leg	UBERON:0001383	55.52	gold quality
prefrontal cortex	UBERON:0000451	55.50	gold quality
primary visual cortex	UBERON:0002436	55.07	gold quality
blood	UBERON:0000178	54.05	gold quality
gastrocnemius	UBERON:0001388	53.88	gold quality
islet of Langerhans	UBERON:0000006	53.36	gold quality
liver	UBERON:0002107	53.36	gold quality
calcaneal tendon	UBERON:0003701	52.68	silver quality
lymph node	UBERON:0000029	52.20	gold quality
endometrium	UBERON:0001295	51.96	silver quality
tonsil	UBERON:0002372	51.76	gold quality
multicellular organism	UBERON:0000468	50.83	gold quality
corpus callosum	UBERON:0002336	50.04	gold quality
apex of heart	UBERON:0002098	49.88	gold quality
kidney	UBERON:0002113	48.36	gold quality
pancreas	UBERON:0001264	48.05	gold quality
lung	UBERON:0002048	46.75	gold quality
heart left ventricle	UBERON:0002084	46.42	gold quality
right lobe of liver	UBERON:0001114	46.28	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.