LINC01602

Summary

LINC01602 (long intergenic non-protein coding RNA 1602, HGNC:51634) is a long non-coding RNA gene on chromosome 8q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51634
Approved symbol	LINC01602
Name	long intergenic non-protein coding RNA 1602
Location	8q12.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	T1560
Ensembl gene	ENSG00000205293
Ensembl biotype	lncRNA
Entrez	100505477
RNAcentral	URS00008121EE — lncRNA, 2122 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000522992, ENST00000650579, ENST00000668111, ENST00000805089, ENST00000805090, ENST00000805091, ENST00000805092, ENST00000805093

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000522992 — 3 exons

Exon	Start	End
ENSE00002098379	57978358	57978484
ENSE00002102466	57982266	57984126
ENSE00002132043	57980894	57981014

Expression profiles

Bgee: expression breadth broad, 71 present calls, max score 68.98.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1108 / max 29.7535, expressed in 19 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
88965	0.0505	12
88967	0.0244	9
88966	0.0239	9
205193	0.0120	5

Top tissues by expression

71 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.98	gold quality
islet of Langerhans	UBERON:0000006	60.51	gold quality
tonsil	UBERON:0002372	59.35	silver quality
placenta	UBERON:0001987	57.61	gold quality
ganglionic eminence	UBERON:0004023	56.59	silver quality
myometrium	UBERON:0001296	55.35	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	53.90	gold quality
urinary bladder	UBERON:0001255	52.83	silver quality
calcaneal tendon	UBERON:0003701	52.44	silver quality
right lobe of liver	UBERON:0001114	51.64	gold quality
liver	UBERON:0002107	50.97	gold quality
pituitary gland	UBERON:0000007	50.16	gold quality
fallopian tube	UBERON:0003889	49.98	gold quality
blood	UBERON:0000178	49.90	silver quality
muscle of leg	UBERON:0001383	49.27	silver quality
tibial artery	UBERON:0007610	48.82	gold quality
esophagus mucosa	UBERON:0002469	48.80	gold quality
prefrontal cortex	UBERON:0000451	48.34	silver quality
monocyte	CL:0000576	48.26	silver quality
adenohypophysis	UBERON:0002196	48.11	gold quality
corpus callosum	UBERON:0002336	47.40	silver quality
multicellular organism	UBERON:0000468	46.79	gold quality
adipose tissue	UBERON:0001013	46.59	gold quality
omental fat pad	UBERON:0010414	46.42	gold quality
cerebellar hemisphere	UBERON:0002245	46.11	silver quality
nucleus accumbens	UBERON:0001882	46.09	gold quality
subcutaneous adipose tissue	UBERON:0002190	45.98	gold quality
right uterine tube	UBERON:0001302	45.90	silver quality
left lobe of thyroid gland	UBERON:0001120	45.89	gold quality
gall bladder	UBERON:0002110	45.75	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.77

Regulation

Is transcription factor: no

Literature-anchored findings (GeneRIF, showing 1)

• Gene T1560 is upregulated by thyroid transcription factor-2 and shows a highly thyroid-specific expression pattern. (PMID:15223130)

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.