LINC01603

Summary

LINC01603 (long intergenic non-protein coding RNA 1603, HGNC:51652) is a long non-coding RNA gene on chromosome 8q13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51652
Approved symbol	LINC01603
Name	long intergenic non-protein coding RNA 1603
Location	8q13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253479
Ensembl biotype	lncRNA
Entrez	100505739
RNAcentral	URS000075A7D2 — lncRNA, 1464 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000517343, ENST00000519557, ENST00000653348, ENST00000659866, ENST00000666807, ENST00000720959, ENST00000720960, ENST00000720961, ENST00000720962, ENST00000720963, ENST00000720964, ENST00000720965, ENST00000720966

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000517343 — 3 exons

Exon	Start	End
ENSE00002094835	69429976	69430048
ENSE00004040255	69447587	69448282
ENSE00004040259	69424842	69425721

Expression profiles

Bgee: expression breadth broad, 63 present calls, max score 89.28.

Top tissues by expression

71 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
cerebellar vermis	UBERON:0004720	89.28	gold quality
quadriceps femoris	UBERON:0001377	87.99	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.19	gold quality
left testis	UBERON:0004533	70.42	gold quality
testis	UBERON:0000473	70.03	gold quality
right testis	UBERON:0004534	69.78	gold quality
skeletal muscle tissue	UBERON:0001134	68.62	silver quality
lung	UBERON:0002048	67.02	silver quality
liver	UBERON:0002107	66.18	silver quality
bone marrow	UBERON:0002371	66.15	silver quality
spleen	UBERON:0002106	65.21	silver quality
thymus	UBERON:0002370	62.70	silver quality
blood	UBERON:0000178	57.22	gold quality
frontal cortex	UBERON:0001870	54.72	gold quality
monocyte	CL:0000576	54.09	gold quality
prefrontal cortex	UBERON:0000451	54.04	gold quality
multicellular organism	UBERON:0000468	53.96	gold quality
urinary bladder	UBERON:0001255	53.73	gold quality
prostate gland	UBERON:0002367	53.35	silver quality
duodenum	UBERON:0002114	51.41	gold quality
pancreas	UBERON:0001264	51.28	silver quality
uterine cervix	UBERON:0000002	49.76	silver quality
anterior cingulate cortex	UBERON:0009835	49.12	gold quality
islet of Langerhans	UBERON:0000006	48.72	silver quality
left ovary	UBERON:0002119	46.27	gold quality
muscle of leg	UBERON:0001383	45.71	gold quality
brain	UBERON:0000955	45.65	gold quality
gastrocnemius	UBERON:0001388	45.54	gold quality
hypothalamus	UBERON:0001898	44.97	gold quality
gall bladder	UBERON:0002110	44.90	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.94

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.