LINC01611

Summary

LINC01611 (long intergenic non-protein coding RNA 1611, HGNC:51791) is a long non-coding RNA gene on chromosome 6q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51791
Approved symbol	LINC01611
Name	long intergenic non-protein coding RNA 1611
Location	6q14.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP1-90L14.1, TCONS_l2_00025430
Ensembl gene	ENSG00000231776
Ensembl biotype	lncRNA
Entrez	105377880
RNAcentral	URS00008E3A77 — lncRNA, 582 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 14 — 14 lncRNA

ENST00000428896, ENST00000454172, ENST00000454981, ENST00000790992, ENST00000790993, ENST00000790994, ENST00000790995, ENST00000790996, ENST00000790997, ENST00000790998, ENST00000790999, ENST00000791000, ENST00000791001, ENST00000791002

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428896 — 4 exons

Exon	Start	End
ENSE00001615919	84474827	84474929
ENSE00001635707	84470791	84470904
ENSE00001647736	84421048	84421242
ENSE00001701493	84444387	84444451

Expression profiles

Bgee: expression breadth broad, 90 present calls, max score 92.80.

Top tissues by expression

90 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.80	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.72	silver quality
calcaneal tendon	UBERON:0003701	68.11	gold quality
sural nerve	UBERON:0015488	64.91	gold quality
right coronary artery	UBERON:0001625	63.69	gold quality
lymph node	UBERON:0000029	62.65	gold quality
right lobe of liver	UBERON:0001114	61.42	gold quality
tibial artery	UBERON:0007610	59.59	gold quality
popliteal artery	UBERON:0002250	59.57	gold quality
prefrontal cortex	UBERON:0000451	59.54	gold quality
left coronary artery	UBERON:0001626	58.63	gold quality
monocyte	CL:0000576	56.65	gold quality
placenta	UBERON:0001987	56.36	gold quality
muscle of leg	UBERON:0001383	55.13	gold quality
descending thoracic aorta	UBERON:0002345	54.91	gold quality
thoracic aorta	UBERON:0001515	54.26	gold quality
ascending aorta	UBERON:0001496	53.97	gold quality
primary visual cortex	UBERON:0002436	53.79	gold quality
cortex of kidney	UBERON:0001225	53.50	gold quality
gastrocnemius	UBERON:0001388	53.07	gold quality
superior frontal gyrus	UBERON:0002661	51.76	gold quality
heart	UBERON:0000948	51.59	gold quality
islet of Langerhans	UBERON:0000006	51.56	gold quality
subcutaneous adipose tissue	UBERON:0002190	50.54	gold quality
blood	UBERON:0000178	50.50	silver quality
body of pancreas	UBERON:0001150	50.48	gold quality
amygdala	UBERON:0001876	49.85	gold quality
urinary bladder	UBERON:0001255	49.59	gold quality
left uterine tube	UBERON:0001303	49.35	gold quality
adipose tissue	UBERON:0001013	49.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.