LINC01618

Summary

LINC01618 (long intergenic non-protein coding RNA 1618, HGNC:27195) is a long non-coding RNA gene on chromosome 4q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27195
Approved symbol	LINC01618
Name	long intergenic non-protein coding RNA 1618
Location	4q12
Locus type	RNA, long non-coding
Status	Approved
Aliases	LOC152578
Ensembl gene	ENSG00000250302
Ensembl biotype	lncRNA
Entrez	152578
RNAcentral	URS000075991D — lncRNA, 746 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000653034

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000653034 — 2 exons

Exon	Start	End
ENSE00003866384	52752034	52753440
ENSE00003884560	52750883	52751423

Expression profiles

Bgee: expression breadth ubiquitous, 119 present calls, max score 76.96.

Top tissues by expression

119 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.96	gold quality
placenta	UBERON:0001987	65.62	gold quality
ventricular zone	UBERON:0003053	65.28	gold quality
ganglionic eminence	UBERON:0004023	64.75	gold quality
bone marrow cell	CL:0002092	63.60	silver quality
stromal cell of endometrium	CL:0002255	57.95	gold quality
bone marrow	UBERON:0002371	54.01	silver quality
prefrontal cortex	UBERON:0000451	53.61	gold quality
skeletal muscle tissue	UBERON:0001134	53.54	silver quality
primary visual cortex	UBERON:0002436	53.42	gold quality
metanephros cortex	UBERON:0010533	53.11	gold quality
duodenum	UBERON:0002114	52.35	gold quality
cortex of kidney	UBERON:0001225	52.21	gold quality
gall bladder	UBERON:0002110	51.94	gold quality
endometrium	UBERON:0001295	51.52	gold quality
smooth muscle tissue	UBERON:0001135	51.34	gold quality
kidney	UBERON:0002113	51.30	gold quality
left ovary	UBERON:0002119	51.25	gold quality
liver	UBERON:0002107	51.19	silver quality
islet of Langerhans	UBERON:0000006	51.17	gold quality
monocyte	CL:0000576	51.11	silver quality
ovary	UBERON:0000992	50.92	gold quality
calcaneal tendon	UBERON:0003701	50.25	silver quality
lymph node	UBERON:0000029	50.01	gold quality
adult mammalian kidney	UBERON:0000082	50.01	gold quality
blood	UBERON:0000178	49.92	gold quality
heart left ventricle	UBERON:0002084	49.79	gold quality
frontal cortex	UBERON:0001870	48.62	gold quality
tibial artery	UBERON:0007610	48.61	gold quality
adrenal tissue	UBERON:0018303	48.61	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.