LINC01626

Summary

LINC01626 (long intergenic non-protein coding RNA 1626, HGNC:52257) is a long non-coding RNA gene on chromosome 6q13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52257
Approved symbol	LINC01626
Name	long intergenic non-protein coding RNA 1626
Location	6q13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223765
Ensembl biotype	lncRNA
Entrez	102724000
RNAcentral	URS000075C014 — lncRNA, 773 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000431997, ENST00000654769, ENST00000663404, ENST00000816723, ENST00000816724, ENST00000816725, ENST00000816726, ENST00000816727, ENST00000816728, ENST00000816729, ENST00000816730, ENST00000816731

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000431997 — 4 exons

Exon	Start	End
ENSE00001632027	71450834	71450906
ENSE00001693511	71458479	71458671
ENSE00001723156	71453004	71453094
ENSE00001806371	71458780	71458874

Expression profiles

Bgee: expression breadth broad, 47 present calls, max score 55.29.

Top tissues by expression

47 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
adult mammalian kidney	UBERON:0000082	55.29	gold quality
monocyte	CL:0000576	54.58	gold quality
blood	UBERON:0000178	52.33	silver quality
cortex of kidney	UBERON:0001225	48.17	gold quality
nucleus accumbens	UBERON:0001882	47.72	gold quality
cerebellar cortex	UBERON:0002129	47.04	silver quality
right hemisphere of cerebellum	UBERON:0014890	46.87	silver quality
gastrocnemius	UBERON:0001388	46.58	gold quality
tibial artery	UBERON:0007610	45.87	gold quality
body of pancreas	UBERON:0001150	45.84	silver quality
thoracic mammary gland	UBERON:0005200	45.76	gold quality
left testis	UBERON:0004533	45.56	gold quality
testis	UBERON:0000473	45.33	gold quality
omental fat pad	UBERON:0010414	44.82	gold quality
esophagus mucosa	UBERON:0002469	44.63	gold quality
right testis	UBERON:0004534	44.63	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	44.33	gold quality
left coronary artery	UBERON:0001626	44.14	gold quality
ascending aorta	UBERON:0001496	44.01	gold quality
substantia nigra	UBERON:0002038	44.01	gold quality
subcutaneous adipose tissue	UBERON:0002190	43.62	gold quality
Ammon’s horn	UBERON:0001954	43.05	silver quality
anterior cingulate cortex	UBERON:0009835	42.73	silver quality
lower esophagus muscularis layer	UBERON:0035833	42.70	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	42.66	gold quality
heart	UBERON:0000948	41.57	silver quality
transverse colon	UBERON:0001157	41.09	silver quality
small intestine	UBERON:0002108	40.95	gold quality
left ovary	UBERON:0002119	40.86	silver quality
muscle layer of sigmoid colon	UBERON:0035805	40.65	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.