LINC01634

Summary

LINC01634 (long intergenic non-protein coding RNA 1634, HGNC:52421) is a long non-coding RNA gene on chromosome 22q11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52421
Approved symbol	LINC01634
Name	long intergenic non-protein coding RNA 1634
Location	22q11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235295
Ensembl biotype	lncRNA
Entrez	100192420
RNAcentral	URS00003870FB — lncRNA, 2379 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000443243, ENST00000801735, ENST00000801736, ENST00000801737, ENST00000801738

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000443243 — 2 exons

Exon	Start	End
ENSE00001722875	18035760	18037970
ENSE00004191369	18029282	18029554

Expression profiles

Bgee: expression breadth broad, 64 present calls, max score 82.54.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0120 / max 4.9934, expressed in 9 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
191003	0.0120	9

Top tissues by expression

64 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skeletal muscle tissue	UBERON:0001134	82.54	gold quality
hindlimb stylopod muscle	UBERON:0004252	76.75	gold quality
muscle of leg	UBERON:0001383	71.41	gold quality
gastrocnemius	UBERON:0001388	68.65	gold quality
bone marrow cell	CL:0002092	64.79	silver quality
thoracic mammary gland	UBERON:0005200	57.46	gold quality
thyroid gland	UBERON:0002046	55.26	gold quality
lymph node	UBERON:0000029	51.76	gold quality
heart left ventricle	UBERON:0002084	51.07	gold quality
multicellular organism	UBERON:0000468	50.85	gold quality
heart	UBERON:0000948	49.77	gold quality
duodenum	UBERON:0002114	49.61	gold quality
prefrontal cortex	UBERON:0000451	48.81	silver quality
urinary bladder	UBERON:0001255	48.69	silver quality
vermiform appendix	UBERON:0001154	48.17	gold quality
islet of Langerhans	UBERON:0000006	47.86	gold quality
apex of heart	UBERON:0002098	47.42	gold quality
liver	UBERON:0002107	46.86	silver quality
endometrium	UBERON:0001295	46.46	silver quality
saliva-secreting gland	UBERON:0001044	46.37	gold quality
skin of abdomen	UBERON:0001416	46.28	gold quality
minor salivary gland	UBERON:0001830	46.11	gold quality
placenta	UBERON:0001987	46.00	silver quality
gall bladder	UBERON:0002110	45.48	silver quality
zone of skin	UBERON:0000014	44.75	gold quality
small intestine	UBERON:0002108	44.69	gold quality
blood	UBERON:0000178	43.81	silver quality
popliteal artery	UBERON:0002250	43.47	gold quality
tibial artery	UBERON:0007610	43.43	gold quality
right lobe of liver	UBERON:0001114	43.42	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.