LINC01651

Summary

LINC01651 (long intergenic non-protein coding RNA 1651, HGNC:52439) is a long non-coding RNA gene on chromosome 22q11.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52439
Approved symbol	LINC01651
Name	long intergenic non-protein coding RNA 1651
Location	22q11.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000279920
Ensembl biotype	lncRNA
Entrez	105372944
RNAcentral	URS0000EF027B — lncRNA, 566 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000624642, ENST00000666255

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000624642 — 2 exons

Exon	Start	End
ENSE00003758971	21354563	21354849
ENSE00003760327	21355701	21355763

Expression profiles

Bgee: expression breadth broad, 89 present calls, max score 90.37.

Top tissues by expression

89 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.37	gold quality
bone marrow cell	CL:0002092	68.32	silver quality
bone marrow	UBERON:0002371	67.44	gold quality
skeletal muscle tissue	UBERON:0001134	63.63	silver quality
right testis	UBERON:0004534	60.67	gold quality
testis	UBERON:0000473	60.47	gold quality
left testis	UBERON:0004533	60.21	gold quality
blood	UBERON:0000178	58.03	gold quality
vermiform appendix	UBERON:0001154	56.80	gold quality
rectum	UBERON:0001052	55.11	gold quality
liver	UBERON:0002107	54.49	silver quality
gall bladder	UBERON:0002110	53.93	gold quality
islet of Langerhans	UBERON:0000006	53.38	gold quality
monocyte	CL:0000576	53.21	gold quality
muscle of leg	UBERON:0001383	52.59	gold quality
gastrocnemius	UBERON:0001388	52.02	gold quality
multicellular organism	UBERON:0000468	50.75	gold quality
lymph node	UBERON:0000029	50.30	gold quality
temporal lobe	UBERON:0001871	49.68	gold quality
right lobe of liver	UBERON:0001114	48.69	silver quality
right ovary	UBERON:0002118	48.04	gold quality
tibial artery	UBERON:0007610	47.70	gold quality
prefrontal cortex	UBERON:0000451	47.58	silver quality
ectocervix	UBERON:0012249	47.48	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	46.84	gold quality
ovary	UBERON:0000992	46.19	gold quality
heart left ventricle	UBERON:0002084	46.16	gold quality
right lobe of thyroid gland	UBERON:0001119	46.12	gold quality
stomach	UBERON:0000945	45.65	gold quality
body of stomach	UBERON:0001161	45.58	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.