LINC01667

Summary

LINC01667 (long intergenic non-protein coding RNA 1667, HGNC:52455) is a long non-coding RNA gene on chromosome 21p11.2.

At a glance

• Gene type: non-coding (transcribed_processed_pseudogene) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52455
Approved symbol	LINC01667
Name	long intergenic non-protein coding RNA 1667
Location	21p11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000280081
Ensembl biotype	transcribed_processed_pseudogene
Entrez	441058
RNAcentral	URS000075C5BA — lncRNA, 1207 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 transcribed_processed_pseudogene

ENST00000623929

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000623929 — 1 exons

Exon	Start	End
ENSE00003755561	9810381	9810503

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 96.03.

Top tissues by expression

235 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	96.03	gold quality
kidney epithelium	UBERON:0004819	89.26	gold quality
epithelial cell of pancreas	CL:0000083	89.12	gold quality
left testis	UBERON:0004533	88.58	gold quality
right testis	UBERON:0004534	88.30	gold quality
testis	UBERON:0000473	85.44	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.43	gold quality
upper arm skin	UBERON:0004263	82.37	gold quality
left ventricle myocardium	UBERON:0006566	80.47	gold quality
cardiac muscle of right atrium	UBERON:0003379	80.37	gold quality
pancreatic ductal cell	CL:0002079	79.55	silver quality
quadriceps femoris	UBERON:0001377	77.12	gold quality
vastus lateralis	UBERON:0001379	76.65	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	76.47	gold quality
ileal mucosa	UBERON:0000331	76.29	silver quality
vena cava	UBERON:0004087	76.19	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.93	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	75.07	gold quality
nasal cavity epithelium	UBERON:0005384	74.93	gold quality
buccal mucosa cell	CL:0002336	74.78	silver quality
layer of synovial tissue	UBERON:0007616	73.42	gold quality
myocardium	UBERON:0002349	73.22	gold quality
tibialis anterior	UBERON:0001385	73.02	silver quality
subthalamic nucleus	UBERON:0001906	72.89	gold quality
body of tongue	UBERON:0011876	72.13	gold quality
biceps brachii	UBERON:0001507	72.01	gold quality
dorsal plus ventral thalamus	UBERON:0001897	71.61	gold quality
cardia of stomach	UBERON:0001162	71.35	gold quality
pharyngeal mucosa	UBERON:0000355	71.34	gold quality
tongue	UBERON:0001723	71.26	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.24

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.