LINC01679

Summary

LINC01679 (long intergenic non-protein coding RNA 1679, HGNC:52469) is a long non-coding RNA gene on chromosome 21q22.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52469
Approved symbol	LINC01679
Name	long intergenic non-protein coding RNA 1679
Location	21q22.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237989
Ensembl biotype	lncRNA
Entrez	101928399
RNAcentral	URS00008E39FD — lncRNA, 2906 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000442815, ENST00000689953, ENST00000757979, ENST00000757980, ENST00000757981

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000442815 — 2 exons

Exon	Start	End
ENSE00001609421	43360892	43362349
ENSE00001611618	43358147	43359486

Expression profiles

Bgee: expression breadth ubiquitous, 146 present calls, max score 77.57.

Top tissues by expression

236 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
parotid gland	UBERON:0001831	77.57	gold quality
bone marrow cell	CL:0002092	76.62	gold quality
heart right ventricle	UBERON:0002080	70.40	gold quality
skin of leg	UBERON:0001511	68.90	gold quality
skin of abdomen	UBERON:0001416	68.53	gold quality
nasal cavity epithelium	UBERON:0005384	68.00	gold quality
myocardium	UBERON:0002349	67.09	gold quality
right atrium auricular region	UBERON:0006631	66.97	gold quality
cardiac atrium	UBERON:0002081	66.67	gold quality
zone of skin	UBERON:0000014	66.66	gold quality
sural nerve	UBERON:0015488	66.33	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	65.89	gold quality
skeletal muscle tissue	UBERON:0001134	65.07	silver quality
cartilage tissue	UBERON:0002418	65.05	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	63.94	gold quality
lymph node	UBERON:0000029	63.57	gold quality
vastus lateralis	UBERON:0001379	63.37	gold quality
quadriceps femoris	UBERON:0001377	63.36	gold quality
adenohypophysis	UBERON:0002196	63.29	gold quality
muscle tissue	UBERON:0002385	63.16	gold quality
cortical plate	UBERON:0005343	63.11	gold quality
bone marrow	UBERON:0002371	62.87	silver quality
vena cava	UBERON:0004087	62.52	gold quality
biceps brachii	UBERON:0001507	62.44	gold quality
pituitary gland	UBERON:0000007	62.24	gold quality
body of tongue	UBERON:0011876	61.13	gold quality
vermiform appendix	UBERON:0001154	60.87	gold quality
spleen	UBERON:0002106	60.64	gold quality
heart	UBERON:0000948	60.37	gold quality
tonsil	UBERON:0002372	60.24	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.04

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.