LINC01699

Summary

LINC01699 (long intergenic non-protein coding RNA 1699, HGNC:52487) is a long non-coding RNA gene on chromosome 1q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52487
Approved symbol	LINC01699
Name	long intergenic non-protein coding RNA 1699
Location	1q25.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	GM140
Ensembl gene	ENSG00000179452
Ensembl biotype	lncRNA
Entrez	100287948
RNAcentral	URS0000195690 — lncRNA, 259 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000319701

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000319701 — 3 exons

Exon	Start	End
ENSE00001220809	181238570	181238604
ENSE00001220823	181237632	181237737
ENSE00001220829	181236388	181236505

Expression profiles

Bgee: expression breadth broad, 77 present calls, max score 67.15.

Top tissues by expression

77 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
prefrontal cortex	UBERON:0000451	67.15	gold quality
monocyte	CL:0000576	66.34	gold quality
superior frontal gyrus	UBERON:0002661	65.86	gold quality
islet of Langerhans	UBERON:0000006	64.75	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	64.61	gold quality
duodenum	UBERON:0002114	62.72	gold quality
heart left ventricle	UBERON:0002084	60.10	gold quality
heart	UBERON:0000948	59.03	gold quality
blood	UBERON:0000178	58.38	gold quality
corpus callosum	UBERON:0002336	57.62	gold quality
gastrocnemius	UBERON:0001388	57.20	gold quality
right atrium auricular region	UBERON:0006631	56.81	gold quality
placenta	UBERON:0001987	56.70	gold quality
adrenal gland	UBERON:0002369	56.52	gold quality
ascending aorta	UBERON:0001496	56.20	gold quality
frontal cortex	UBERON:0001870	56.18	gold quality
Ammon’s horn	UBERON:0001954	55.81	gold quality
body of pancreas	UBERON:0001150	55.58	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	55.18	gold quality
thoracic aorta	UBERON:0001515	54.97	gold quality
Brodmann (1909) area 9	UBERON:0013540	54.57	gold quality
lower esophagus muscularis layer	UBERON:0035833	54.47	gold quality
kidney	UBERON:0002113	54.39	gold quality
lower esophagus	UBERON:0013473	54.39	gold quality
fallopian tube	UBERON:0003889	53.72	gold quality
cerebral cortex	UBERON:0000956	53.68	gold quality
apex of heart	UBERON:0002098	53.29	gold quality
muscle layer of sigmoid colon	UBERON:0035805	53.14	gold quality
endometrium	UBERON:0001295	52.91	gold quality
left adrenal gland cortex	UBERON:0035825	52.88	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.47

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.