LINC01701

Summary

LINC01701 (long intergenic non-protein coding RNA 1701, HGNC:52489) is a long non-coding RNA gene on chromosome 1q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52489
Approved symbol	LINC01701
Name	long intergenic non-protein coding RNA 1701
Location	1q31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232212
Ensembl biotype	lncRNA
Entrez	107985456
RNAcentral	URS0002A33BCF — lncRNA, 1207 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000419614, ENST00000758528, ENST00000758529, ENST00000758530, ENST00000758531

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000419614 — 6 exons

Exon	Start	End
ENSE00001604243	189791579	189791763
ENSE00001606970	189777260	189777337
ENSE00001787081	189775465	189775565
ENSE00004110542	189745543	189745663
ENSE00004110543	189814832	189814976
ENSE00004110546	189767232	189767292

Expression profiles

Bgee: expression breadth broad, 59 present calls, max score 86.05.

Top tissues by expression

59 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.05	gold quality
blood	UBERON:0000178	69.37	gold quality
islet of Langerhans	UBERON:0000006	58.44	gold quality
duodenum	UBERON:0002114	58.44	gold quality
monocyte	CL:0000576	57.81	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.87	gold quality
pancreas	UBERON:0001264	53.04	gold quality
right lobe of thyroid gland	UBERON:0001119	51.32	gold quality
body of pancreas	UBERON:0001150	51.07	gold quality
anterior cingulate cortex	UBERON:0009835	50.90	gold quality
heart left ventricle	UBERON:0002084	49.74	gold quality
thoracic mammary gland	UBERON:0005200	49.43	gold quality
kidney	UBERON:0002113	49.26	gold quality
heart	UBERON:0000948	48.88	gold quality
thyroid gland	UBERON:0002046	48.61	gold quality
right lobe of liver	UBERON:0001114	47.30	silver quality
left lobe of thyroid gland	UBERON:0001120	47.16	gold quality
adult mammalian kidney	UBERON:0000082	47.12	gold quality
right atrium auricular region	UBERON:0006631	46.99	gold quality
upper lobe of left lung	UBERON:0008952	46.97	gold quality
left adrenal gland	UBERON:0001234	46.68	silver quality
tibial artery	UBERON:0007610	46.60	silver quality
left adrenal gland cortex	UBERON:0035825	46.20	gold quality
lung	UBERON:0002048	46.03	gold quality
fundus of stomach	UBERON:0001160	45.60	gold quality
Brodmann (1909) area 9	UBERON:0013540	45.58	silver quality
ascending aorta	UBERON:0001496	45.27	gold quality
body of stomach	UBERON:0001161	44.96	gold quality
right adrenal gland cortex	UBERON:0035827	44.59	silver quality
right adrenal gland	UBERON:0001233	44.50	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.