LINC01705

Summary

LINC01705 (long intergenic non-protein coding RNA 1705, HGNC:52493) is a long non-coding RNA gene on chromosome 1q41.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52493
Approved symbol	LINC01705
Name	long intergenic non-protein coding RNA 1705
Location	1q41
Locus type	RNA, long non-coding
Status	Approved
Aliases	ERLR, TBUR1, RP11-400N13.3
Ensembl gene	ENSG00000232679
Ensembl biotype	lncRNA
Entrez	107985307
RNAcentral	URS0002A6F7A9 — lncRNA, 1907 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 29 — 29 lncRNA

ENST00000412445, ENST00000431729, ENST00000433576, ENST00000438158, ENST00000658927, ENST00000665303, ENST00000668844, ENST00000715677, ENST00000826165, ENST00000826166, ENST00000826167, ENST00000826168, ENST00000826169, ENST00000826170, ENST00000826171, ENST00000826172, ENST00000826173, ENST00000826174, ENST00000826175, ENST00000826176, ENST00000826177, ENST00000826178, ENST00000826179, ENST00000826180, ENST00000826181, ENST00000826182, ENST00000826183, ENST00000826184, ENST00000826185

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000412445 — 4 exons

Exon	Start	End
ENSE00001651178	221978360	221978523
ENSE00001681096	221913648	221913858
ENSE00001758366	221914423	221914531
ENSE00004027549	221918592	221918712

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 86.79.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0110 / max 9.4728, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
17591	0.0110	3

Top tissues by expression

102 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
stromal cell of endometrium	CL:0002255	86.79	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.25	gold quality
lower esophagus mucosa	UBERON:0035834	67.50	gold quality
islet of Langerhans	UBERON:0000006	66.50	gold quality
ventricular zone	UBERON:0003053	64.58	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.62	gold quality
gall bladder	UBERON:0002110	61.56	gold quality
esophagus mucosa	UBERON:0002469	58.62	gold quality
skeletal muscle tissue	UBERON:0001134	58.52	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.46	gold quality
liver	UBERON:0002107	57.62	gold quality
calcaneal tendon	UBERON:0003701	56.94	gold quality
right lobe of liver	UBERON:0001114	55.51	gold quality
monocyte	CL:0000576	55.13	gold quality
esophagus	UBERON:0001043	54.98	gold quality
endometrium	UBERON:0001295	54.72	gold quality
tonsil	UBERON:0002372	54.39	gold quality
vermiform appendix	UBERON:0001154	53.21	gold quality
blood	UBERON:0000178	52.55	gold quality
lymph node	UBERON:0000029	51.90	gold quality
bone marrow	UBERON:0002371	51.68	silver quality
minor salivary gland	UBERON:0001830	51.23	gold quality
prefrontal cortex	UBERON:0000451	51.16	gold quality
muscle of leg	UBERON:0001383	50.12	gold quality
placenta	UBERON:0001987	49.40	gold quality
heart left ventricle	UBERON:0002084	49.35	gold quality
heart	UBERON:0000948	48.29	gold quality
urinary bladder	UBERON:0001255	48.19	gold quality
myometrium	UBERON:0001296	48.18	gold quality
gastrocnemius	UBERON:0001388	47.91	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.