LINC01706

Summary

LINC01706 (long intergenic non-protein coding RNA 1706, HGNC:52494) is a long non-coding RNA gene on chromosome 20p12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52494
Approved symbol	LINC01706
Name	long intergenic non-protein coding RNA 1706
Location	20p12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000224711
Ensembl biotype	lncRNA
Entrez	101929312
RNAcentral	URS000075A629 — lncRNA, 1651 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000455299, ENST00000653032, ENST00000654533, ENST00000663217

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000455299 — 3 exons

Exon	Start	End
ENSE00001714909	7367280	7367632
ENSE00001757366	7347467	7347676
ENSE00001760666	7360621	7360805

Expression profiles

Bgee: expression breadth broad, 11 present calls, max score 63.54.

Top tissues by expression

164 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
muscle of leg	UBERON:0001383	63.54	gold quality
monocyte	CL:0000576	55.91	gold quality
esophagus squamous epithelium	UBERON:0006920	52.71	gold quality
sperm	CL:0000019	51.04	gold quality
oocyte	CL:0000023	50.79	gold quality
oral cavity	UBERON:0000167	50.48	gold quality
esophagus	UBERON:0001043	50.05	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	48.99	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	47.36	silver quality
lower esophagus muscularis layer	UBERON:0035833	46.99	gold quality
body of tongue	UBERON:0011876	45.06	gold quality
mouth mucosa	UBERON:0003729	44.74	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	43.37	gold quality
pharyngeal mucosa	UBERON:0000355	43.10	gold quality
secondary oocyte	CL:0000655	42.57	gold quality
Brodmann (1909) area 9	UBERON:0013540	42.55	silver quality
blood	UBERON:0000178	42.44	gold quality
gingiva	UBERON:0001828	42.22	gold quality
heart left ventricle	UBERON:0002084	41.97	gold quality
upper lobe of lung	UBERON:0008948	41.92	silver quality
bone marrow	UBERON:0002371	41.82	gold quality
lower lobe of lung	UBERON:0008949	41.77	silver quality
tongue	UBERON:0001723	41.72	gold quality
Brodmann (1909) area 23	UBERON:0013554	41.56	gold quality
right atrium auricular region	UBERON:0006631	41.55	silver quality
cortex of kidney	UBERON:0001225	41.47	gold quality
vastus lateralis	UBERON:0001379	41.41	gold quality
corpus callosum	UBERON:0002336	41.38	gold quality
quadriceps femoris	UBERON:0001377	41.37	gold quality
adult mammalian kidney	UBERON:0000082	41.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.