LINC01712

Summary

LINC01712 (long intergenic non-protein coding RNA 1712, HGNC:52499) is a long non-coding RNA gene on chromosome 1p31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52499
Approved symbol	LINC01712
Name	long intergenic non-protein coding RNA 1712
Location	1p31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231364
Ensembl biotype	lncRNA
Entrez	101927542
RNAcentral	URS0000BC43FD — lncRNA, 762 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 21 — 21 lncRNA

ENST00000446227, ENST00000660423, ENST00000664539, ENST00000794273, ENST00000794274, ENST00000794275, ENST00000794276, ENST00000794277, ENST00000794278, ENST00000794279, ENST00000794280, ENST00000794281, ENST00000794282, ENST00000794283, ENST00000794284, ENST00000794285, ENST00000794286, ENST00000794287, ENST00000794288, ENST00000794289, ENST00000794290

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000446227 — 3 exons

Exon	Start	End
ENSE00001657735	83445967	83446674
ENSE00001723509	83454658	83454879
ENSE00003785198	83462574	83462702

Expression profiles

Bgee: expression breadth broad, 46 present calls, max score 81.33.

Top tissues by expression

46 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.33	gold quality
right testis	UBERON:0004534	67.53	gold quality
left testis	UBERON:0004533	67.27	gold quality
testis	UBERON:0000473	67.06	gold quality
sural nerve	UBERON:0015488	65.44	silver quality
liver	UBERON:0002107	58.73	gold quality
multicellular organism	UBERON:0000468	58.64	gold quality
tonsil	UBERON:0002372	57.98	silver quality
gastrocnemius	UBERON:0001388	52.97	gold quality
kidney	UBERON:0002113	52.38	silver quality
tibial artery	UBERON:0007610	50.86	silver quality
blood	UBERON:0000178	49.70	silver quality
lymph node	UBERON:0000029	48.52	silver quality
stomach	UBERON:0000945	47.99	gold quality
monocyte	CL:0000576	47.78	silver quality
tibial nerve	UBERON:0001323	47.76	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	47.52	gold quality
lung	UBERON:0002048	47.24	gold quality
superior frontal gyrus	UBERON:0002661	47.06	silver quality
pancreas	UBERON:0001264	46.31	silver quality
adult mammalian kidney	UBERON:0000082	46.27	silver quality
islet of Langerhans	UBERON:0000006	45.77	silver quality
nucleus accumbens	UBERON:0001882	45.28	silver quality
popliteal artery	UBERON:0002250	45.22	silver quality
vermiform appendix	UBERON:0001154	45.02	silver quality
thyroid gland	UBERON:0002046	44.42	silver quality
body of pancreas	UBERON:0001150	43.13	silver quality
intestine	UBERON:0000160	41.66	silver quality
skin of leg	UBERON:0001511	41.22	silver quality
spleen	UBERON:0002106	40.85	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.