LINC01713

Summary

LINC01713 (long intergenic non-protein coding RNA 1713, HGNC:52500) is a long non-coding RNA gene on chromosome 20p12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52500
Approved symbol	LINC01713
Name	long intergenic non-protein coding RNA 1713
Location	20p12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228482
Ensembl biotype	lncRNA
Entrez	105372516
RNAcentral	URS0000BC458C — lncRNA, 1449 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000445589, ENST00000655019, ENST00000658541, ENST00000742969, ENST00000742970

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000445589 — 3 exons

Exon	Start	End
ENSE00001594390	6731258	6731743
ENSE00001720240	6735777	6736136
ENSE00001791637	6735039	6735124

Expression profiles

Bgee: expression breadth broad, 56 present calls, max score 68.60.

Top tissues by expression

56 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	68.60	gold quality
urinary bladder	UBERON:0001255	59.62	gold quality
gall bladder	UBERON:0002110	58.46	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.43	gold quality
lymph node	UBERON:0000029	57.28	gold quality
liver	UBERON:0002107	53.27	silver quality
islet of Langerhans	UBERON:0000006	53.04	gold quality
adrenal gland	UBERON:0002369	52.36	silver quality
monocyte	CL:0000576	52.16	gold quality
duodenum	UBERON:0002114	50.36	gold quality
blood	UBERON:0000178	49.73	silver quality
small intestine	UBERON:0002108	48.16	gold quality
left lobe of thyroid gland	UBERON:0001120	47.98	gold quality
tibial nerve	UBERON:0001323	46.22	silver quality
intestine	UBERON:0000160	46.02	gold quality
testis	UBERON:0000473	45.51	gold quality
right testis	UBERON:0004534	45.16	gold quality
left testis	UBERON:0004533	45.13	gold quality
esophagus mucosa	UBERON:0002469	45.10	gold quality
gastrocnemius	UBERON:0001388	44.97	silver quality
colon	UBERON:0001155	44.30	gold quality
small intestine Peyer’s patch	UBERON:0003454	43.37	gold quality
stomach	UBERON:0000945	43.35	gold quality
body of stomach	UBERON:0001161	43.18	silver quality
esophagogastric junction muscularis propria	UBERON:0035841	42.87	gold quality
right atrium auricular region	UBERON:0006631	42.76	silver quality
anterior cingulate cortex	UBERON:0009835	42.40	silver quality
prefrontal cortex	UBERON:0000451	42.31	silver quality
spleen	UBERON:0002106	41.85	silver quality
left adrenal gland	UBERON:0001234	41.59	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.